Gene Hoch_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1882 
Symbol 
ID8544264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2591942 
End bp2592490 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content71% 
IMG OID646386587 
Producthypothetical protein 
Protein accessionYP_003266322 
Protein GI262195113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00948588 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.985254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCTC TACCGACCCC GGCCGCAGCG CACGCGGCCT CCCAGCGCCG CCTGCGTCGT 
TCCCGGGCGC TGCGCGTGGC CGCGTGCGCG CTGCTGGCGA CCGTCGCGCT GGGCTGCGAG
GAGAGCGGGC AGAACCCGGT CGACTCGCTC AACTCGGCGT GGCAGCGCGC CGGCCTGTCG
CCCACCGCTT TCGGCGTTAT CGAGGACGAG GCGCTCAAAC CCGGCACCTG CCACGAGGGC
AAAGTCGACG GCTTGTACGT GGTCGTGTGC CGCTATGCCG ACGACTCCGC CGCGCACGCC
GCCCAGAATA CCGGCCTCGA CAAAGTCGGT GACACCACCG GCCTGTCGCT GGCCGCGGGC
CAGAACCTGC TCATCGTCGT CGACCGCGAG GGCGGCGACC CCACCGGCAA GAAGATCAAC
GCCATCGCCA CCGCCTTTCG CGACACCTAC GCGCCCCAAA GCGGCGACAA GAGCGGCGGC
AAAGACGAGG GCAAGGCCGA GGGCGAAGCC GCCGGCAAAG ACGGCGACGC CGCCAACGAC
GGCAAATGA
 
Protein sequence
MSALPTPAAA HAASQRRLRR SRALRVAACA LLATVALGCE ESGQNPVDSL NSAWQRAGLS 
PTAFGVIEDE ALKPGTCHEG KVDGLYVVVC RYADDSAAHA AQNTGLDKVG DTTGLSLAAG
QNLLIVVDRE GGDPTGKKIN AIATAFRDTY APQSGDKSGG KDEGKAEGEA AGKDGDAAND
GK