Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1845 |
Symbol | |
ID | 8544227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2542105 |
End bp | 2543619 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646386551 |
Product | amino acid/peptide transporter |
Protein accession | YP_003266286 |
Protein GI | 262195077 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.241988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACGA AACAGCATGA CGAGCCCGCG ATCGAGGGCT TGGCCGAGGC CGGGCAGGGA CCGGCGCACA CCGTCGATAG CGGGACATTC CTCGGCCATC CCAAGGGCCT GTGGATCATC TTCCTCACCG AGATGTGGGA GCGCTTCAGC TACTACGGCA TGCGCGCCCT CTTGGTGCTG TACCTGGTGG CCAAGACCTC GGGCGAAAAC CCCGGCTTTG GCTGGAGCGA CGCCGACGCC TCCACCCTCT ACGGCTTCTA CACCGGCGCC GTGTACCTCA CGCCGCTGCT CGGAGGCCTC CTCGCCGACC GCATTCTCGG CACCCATCGC TCCATCGTGC TCGGCTCGTG GATCATGGCC GCCGGCCACG TGTGCCTGGC GTTTACCGAG TTCTTCAGCG GCGGCAGCGC CGAGGTCTTC ACCTTCGACA CCGCGCCCGG GGCGGTGGGC TGCTTCGTCC TCGGACTGGC CCTGATCGTC ATCGGCACCG GCTTCTTCAA GCCCTGCGCC TCGGCCATGG TCGGCCAGCT CTACGGCGAC GAGGATCCGC GCCGCGATTC CGCGTTCACC ATCTTCTACA TGGGCGTCAA CGTCGGCGCC CTGCTCGCGC CTCTGGTCGC CGGTTCGCTG GGCGAGCAGG TGGGCTGGCA CTGGGGCTTC GGCTCGGCCG CCGTCGGCAT GATGGCCGGC CTGGCCACCT ACTCGTGGCT GCGTCCGCGC TACCTCGCCG GCATCGGCCT GGCGCCCAAG GACGCCGAGG CCGCGCCCCG CGCGCAGCTC TCACCCGCGG CCAAGGCCGA GCAGGAGAAA GAGCAGCACG AGCAGACCCG GCCGCTCACC AAGGTCGACC GCGATCGCCT CATCGTCGTC GTGATCATGT CGTTCTTCGC CATCGCCTTC TGGCTCGGCT TCGAACAGGC GGGCTCGTCG CTCACGCTCT TCGCCTCCGA GCAGACCGAC CGCAGGTTCT TCGGCTTGGA GTTTCCCGCG ACCTGGTATC AGGCCGCCAA CCCGGCCTTC ATCCTGCTGC TCGGCCCGGC CTTCGCCGCC CTGTGGCCGT GGCTGGGCAA GCGCGGCCGG CAGCCCTCGA CGCCGGTGAA ATTCGCCGCC GGCCTGCTCA TCCTCGGCCT CGGCTACCTG GTGATGATAC CGGCAGCCCT CGAGGCCATG GGGGATGGTC TGGCTGGTTG GCACTGGTTG GTGATGCTGT ATTTCATGCA TACAGCCGGT GAGCTGTGCA TCTCGCCGGT GGCGCTGGCC ATGGTCACGC GCCTGTCGCC GGCGCGTTTG GTGTCGCTGA TGATGGGCGT CTACTACGCG ATGCTGGCGA TCGCCAACAT CTTGGCCGGC TGGGTGGCCG CCTCGTCGAC GACCATCGCC GAGAGCGGCA CGATCAACAT CTTCGGCGGA CAGGCGGACT TTTTCCTGCT GCTGTTCTTG GGCCCCTTCG GGGTCGGCGT GCTGGTCCTG CTGCTCTCGC CGCTGCTCAA GAAGCTGATG CACGGCCGCC ACTGA
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Protein sequence | MSTKQHDEPA IEGLAEAGQG PAHTVDSGTF LGHPKGLWII FLTEMWERFS YYGMRALLVL YLVAKTSGEN PGFGWSDADA STLYGFYTGA VYLTPLLGGL LADRILGTHR SIVLGSWIMA AGHVCLAFTE FFSGGSAEVF TFDTAPGAVG CFVLGLALIV IGTGFFKPCA SAMVGQLYGD EDPRRDSAFT IFYMGVNVGA LLAPLVAGSL GEQVGWHWGF GSAAVGMMAG LATYSWLRPR YLAGIGLAPK DAEAAPRAQL SPAAKAEQEK EQHEQTRPLT KVDRDRLIVV VIMSFFAIAF WLGFEQAGSS LTLFASEQTD RRFFGLEFPA TWYQAANPAF ILLLGPAFAA LWPWLGKRGR QPSTPVKFAA GLLILGLGYL VMIPAALEAM GDGLAGWHWL VMLYFMHTAG ELCISPVALA MVTRLSPARL VSLMMGVYYA MLAIANILAG WVAASSTTIA ESGTINIFGG QADFFLLLFL GPFGVGVLVL LLSPLLKKLM HGRH
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