Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1710 |
Symbol | |
ID | 8544092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2325919 |
End bp | 2327601 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646386418 |
Product | SirA family protein |
Protein accession | YP_003266153 |
Protein GI | 262194944 |
COG category | [S] Function unknown |
COG ID | [COG2210] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0499089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA GCACCAGTTC ACACGTGACC CATCTCGACC TTCGCGGCCT CAAATGTCCG GCCCCGGTGG TGTCCGCCAG CAAGGCGGTC AAGAAGCTCG AGGGCCGCAC CGCGGTGTTG CACATCCTGG CCGACGATGA CGGCTTTGCC GCCGATCTCG AGGTCTGGTG CCGGGCCACC CGGGCCGAGT TGCTCACCAT CGAGCGCTCC GAGGAGGGCA TCTTCGACGC CACCATCCGC GTCAACGGAC ACCCGGACGA TAAAATCACC GCGCGCCTGC CCACGCCCAC CGCTCGCAGC AGTCGGCCGG CCCTGGCCAC GCCGGCCGGC GGCACCAGCA CCGACGACGC GACCCCGGCC GTGGAGCGCA CGAGCTTCGA CTTCCGCGGC AAGCGCTGCC CCGAGCCGAT CATCCTGCTG GCCAAGGAGG TGCGTCAGCT CGGGGAGTCG GCCGAGTTCG AGGTGCTGGC CGACGACGAC TCCTTCCCCA TGGATATCCG TAGCTGGTGC CGCAGCGCCA ACGCCACCCT GCTCGTGCTC GACGAGCACA GCGGCAGCTA CCGCGCGCTC ATCCGCGCCA AGCCCCGGCC CGGCACCGAG GGCAGCGAGA GCACCGTCAC CACGGCCGCG CCGCCGGTGG CTGAATCCGC GCGCCGCGCC GCGCCCGCTC GCCGGCCGCT GCCGGTGTCG AGCGCGGTCA AGGTGCCGAA CATGGACGCC ACCGAGACCG CGACCATGCC GATTTCGGCC ATCGCGGCGG CCGCCCAGAG CGAGACCCTG GCCGCGCCGC CTGCACCTGC CCGCGCGGCG CCGACGGCCA GCGCCGAGCC GCGCATTCGC GTCGATCTCT CGAGTATGCC GGCGGCCGTC GTGAGCGCGT ATCTCAGCTC GCTCAACCAC ATGCAGGTGG AGCACGCCGA GGCCGAGGTC GAAGTCGAGA TTCTGGCCCG CTACGGCAGC TTTGCCCAGG ATGTGGCCGT GTGGTGCTCG AAGTACGATC ACACCCTCAC GCGCATGAAC ACCGAGTCCG ACCCGATGAG CGCGCGCGTG AGTCTGCGCG CGCCCGTGGA TCGCCCGGGC CAGGCGAGCG GCGATGCGAT CGGTGAGGCG CGCGCAGCCC CGGCGACTTC GTCCGAGCGT CCGACAGAGG CGCTGGTGCC GCTGAGCGAC GAGATGCGCG AGCTGGCGCT GGCCCGGCAG CAGTGCACGC TGCTCGTGCT GCACAACGAT CTCGAGGCCG TGCTGGCCGC GCTCATGACC GCCAACGCCG CGGCTTCCAA CGGCATGCAG GTGGTGCTTT TCTTCGCCTT CTGGGGCGTC AACGTGCTGC GCGCCGACAA GCCGCGCAAG GACGTGCCCG CCGAGAAGGT GTCGCTGATG CAGCGCATGT TCAAGCGCAT GATGCCCAAG GGCCCCACCC GGCAGCGTCT GGGCAAGCTG TCCTTTGGCG GCATGGGCGG CAGCATCATG CGCGGCATCA TGCGCAAGAA GAACATCATG CAGGCCGAGG AGCTTTTGGC CGAGGCCATC GAGCTCGGCG TGCGCTTCAC CGCGTGTTCG ACCAGTATGA CGGTCATGGG CATCACCCGC CGCGACCTCA TGGATCTGCC CAACCTCGAG TACGCGGGCG TGGGCTCGTT CGTGGGCGAG GCCAAGGGCG CCGGCGTCAG CCTGGTGTTC TGA
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Protein sequence | MNASTSSHVT HLDLRGLKCP APVVSASKAV KKLEGRTAVL HILADDDGFA ADLEVWCRAT RAELLTIERS EEGIFDATIR VNGHPDDKIT ARLPTPTARS SRPALATPAG GTSTDDATPA VERTSFDFRG KRCPEPIILL AKEVRQLGES AEFEVLADDD SFPMDIRSWC RSANATLLVL DEHSGSYRAL IRAKPRPGTE GSESTVTTAA PPVAESARRA APARRPLPVS SAVKVPNMDA TETATMPISA IAAAAQSETL AAPPAPARAA PTASAEPRIR VDLSSMPAAV VSAYLSSLNH MQVEHAEAEV EVEILARYGS FAQDVAVWCS KYDHTLTRMN TESDPMSARV SLRAPVDRPG QASGDAIGEA RAAPATSSER PTEALVPLSD EMRELALARQ QCTLLVLHND LEAVLAALMT ANAAASNGMQ VVLFFAFWGV NVLRADKPRK DVPAEKVSLM QRMFKRMMPK GPTRQRLGKL SFGGMGGSIM RGIMRKKNIM QAEELLAEAI ELGVRFTACS TSMTVMGITR RDLMDLPNLE YAGVGSFVGE AKGAGVSLVF
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