Gene Hoch_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1685 
Symbol 
ID8544067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2294508 
End bp2295419 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID646386393 
Producthypothetical protein 
Protein accessionYP_003266128 
Protein GI262194919 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000226604 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000586595 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATACGCTACC GCAACCTGGA ATCGCCTCAC GAACCGCAGA GCCTGGGCGC CGTGCTCAAG 
TGGGCTCTGC TCGACCGCCT CGCGGGTCGC CGCCGACGTT CGCCCCGCCG CGCCGAAGTG
CCGCGCGTGG TCGCCGACCT CGCAAGCATC GAGCAAGCGC CCTCGCTCAC CTGGGTCGGC
CATGCCACCT GGCTGGTGAA CATCGCCGGA CAACGCGTGG TTACCGATCC CGTGTGGTCC
ACGTCCATCG GGCCCGGCGT CACGCGCAAC GTCGAGCCCG GCGTGACCCT CGAGCAGGCC
GCGCCGAGCG TGGTCCTGGT CTCGCACAAT CACCGCGACC ATCTCGACGC GGCCACCATC
GAGCGCATCG GCGATCGCGC CACCTACGTC GTGCCGCAGA ACCTGGGCCA CTTCTTTCGC
AAGCGCGGCC TCACCCGGGT GCACGAACTC GATTGGTGGC AGAGCGTCAC CATCGGCGAG
CTGAGCGTGA GCTTCGTCCC CTCGCAGCAC TGGTCCCAGC GCGGCCTGCT CGACCGCAAC
GACTCGCTGT GGGGCGGCTT CGTCATCGAG GGCGCGCAGC GATCGCTCTA CTTCGCCGGC
GATACCGCGT ACTTCGGCGG CTTCCGCAGC ATCGGCGAGC GCTTCCCCGA CCTCGACGCG
GCGCTCCTGC CGATCGGCGC CTACGACCCG CAGTGGTTCA TGCGCAACCA GCACATGAAC
CCCGACGACG CGGTGGCCGC GTTTCGCGAC CTGGGCGCGC GCCTGCTGTG CGCCATGCAC
TGGGGCACCT TCAAGCTGAC CGACGAGCCA CTGGACGAAC CACCTCAGCT GCTCGAGACC
GCCCGGCAGC GCGAAGGCGT GCCCGCCGAG CAGGTGTGGA TCGCCGCCAT CGGCGAAACC
CGTAGCCTCT GA
 
Protein sequence
MRYRNLESPH EPQSLGAVLK WALLDRLAGR RRRSPRRAEV PRVVADLASI EQAPSLTWVG 
HATWLVNIAG QRVVTDPVWS TSIGPGVTRN VEPGVTLEQA APSVVLVSHN HRDHLDAATI
ERIGDRATYV VPQNLGHFFR KRGLTRVHEL DWWQSVTIGE LSVSFVPSQH WSQRGLLDRN
DSLWGGFVIE GAQRSLYFAG DTAYFGGFRS IGERFPDLDA ALLPIGAYDP QWFMRNQHMN
PDDAVAAFRD LGARLLCAMH WGTFKLTDEP LDEPPQLLET ARQREGVPAE QVWIAAIGET
RSL