| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1645 |
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| Symbol | |
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| ID | 8544027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2242163 |
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| End bp | 2244388 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646386353 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_003266088 |
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| Protein GI | 262194879 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT CTCCCACGAT CATCTACACG AAAACGGACG AGGCCCCGGC CTTGGCCACC
TACGCCTTCC TCCCCGTCAT CGAGGCCTTT GCGGCGCCGG CGGGTGTGAG CGTCGAGACC
CGCGATATCT CGCTCGCCGC TCGCATCCTG GCCGTGTTCG CTGACGTGCT CGAGCCCGAG
CAGAAGGTTC ACGACGCCCT GGCCGAGCTG GGCGAGCTGG CCAAGACGCC CGAGGCCATC
ATCATCAAGT TGCCCAACAT CAGCGCCTCG ATCCCGCAGA TGAAGGCCTG CATCGCCGAG
CTTCAGGGCA AGGGCTACAA GATCCCCGAC TACCCGGAGG AGCCGAAAAA CGACGCGGAG
AAGGCGGCCA AGGCCCGCTA CGACGCGGTC AAGGGCAGCG CGGTCAACCC GGTGCTGCGC
GAGGGCAACT CCGACCGCCG CGCCCCCAAG GCGGTCAAGG AGTACGCGCG CAACAACCCG
CACTCGATGG GCGCCTGGTC TTCGGACAGC AAGTCGCATG TGGCCACGAT GGGCGCGGGC
GATTTCTTCG CCAACGAGAA GAGCGTGACG CTGTCGGCGC CGACCACGGC CCGCATCGAG
CACGTCGACG CCGAGGGCAA GACCACGGTG CTCAAGGGCG GCCTCAAGCT GCTCGAGGGC
GAGGTCATCG ACGGCACCTT CATGAGCAAG AAGGCGCTCA TCGCCTTCCT CGAGGAGCAG
GTCGCCGACG CCAAGAAGGC GGGCGTGCTG TTCTCGCTGC ACATGAAGGC CACGATGATG
AAGGTCAGCG ACCCGATCAT CTTCGGACAC GCGGTCCGCG TCTTTTTCGC CGAGCTGTTC
GAAACGCAGG GCGCCGCGCT CGACAAGCTG GGCTTCGACC CGAACAACGG TCTGGGCACG
CTCACCAGCA GCCTGGCGCA GCTCAGCGAT GACGAGCGCA AGGCCATCGA GTCCACGCTC
GAGAGCATCT ACAAAGAGCG CCCGGCCATG GCCATGGTCA ACTCGGACAA GGGCATCACC
AACCTGCACG TGCCCAGCGA CGTCATCATC GACGCCTCGA TGCCGGCCAT GATCCGCACC
TCGGGCCAGA TGTGGAACGC GGACAACAAG ACCCAGGACA CCAAGGCCGT CATCCCCGAT
AGCAGCTACG CCGGCGTCTA TCAGGAGGTC ATCGACTTCT GCAAGAAGAA CGGCGCCTTC
GACCCGACCA CGATGGGCTC GGTGTCCAAC GTCGGCCTGA TGGCGCAGAA GGCCGAGGAG
TACGGCTCGC ACGACAAGAC CTTCGAGGTC GCGTCGGCCG GTACCGTCCG CGTGGTCGAC
GAAAACGGCA AGGTGCTGAT CGAGCACGCG GTCGAGGCCG GCGACATCTG GCGCGCCTGC
CAGACCAAGG ACGCGCCCAT CCGCGACTGG GTCAAGCTGG CGGTGACGCG CGCCCGCGCC
ACGGGTACGC CGGCCGTGTT CTGGCTGGAC GAGAAGCGCG CCCACGACGC CCGCCTGATC
GAGAAGGTCA AGGTGTACCT GGGCGAGCAC GACACCGAGG GCCTCGAGAT CAAGATCCTG
TCGCCGGTCG AGGCCACCAA GTTCTCGCTC GAGCGCATCG CCGAGGGCAA GGACACCATC
AGCGTCACCG GCAACGTGCT GCGCGATTAC CTCACCGACC TGTTCCCGAT CCTCGAGGTC
GGCACCAGCG CCAAGATGCT GTCGATCGTG CCGCTGATGC AGGGCGGCGG GCTGTTCGAG
ACCGGCGCCG GCGGCTCGGC GCCCAAGCAC GTGCAGCAGT TCGAGGAAGA GGGTCACCTG
CGCTGGGATT CGCTGGGCGA GTTCCTGGCG CTGGCCGCGG CGCTGCAGTT TTTGGCCGAC
AAGTTCGACA ACGCGGGCGC GCGCGTGCTC GGTGAGGCGC TCGACGACGC CACCACCAAG
TACCTGCTCG AGAACCGCTC GCCGTCGCGC AAGGTCAACC AGATCGACAA CCGCGGCAGC
CAGTATTACC TGGCTCGCTA CTGGGCTGAG GCGCTGGCCG CGCAGAGCGC CAACGCCGAG
CTGGCCGCGC GCTTCAAGCC GGTGGCCGAG GCGCTGGCCG GCAAGGAAGA GGCGATCAAC
GGCGAGCTGA TCGGCGCCCA GGGCAAGCCG GCCCACGTGG ACGGTTACTA CTTCCCCGAC
GAGGATCTCG CCACCAAGGC GATGCGTCCC AGCGCCACGT ACAACCAGAT CCTCAGCAAG
ATCTGA
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| Protein sequence | MSQSPTIIYT KTDEAPALAT YAFLPVIEAF AAPAGVSVET RDISLAARIL AVFADVLEPE
QKVHDALAEL GELAKTPEAI IIKLPNISAS IPQMKACIAE LQGKGYKIPD YPEEPKNDAE
KAAKARYDAV KGSAVNPVLR EGNSDRRAPK AVKEYARNNP HSMGAWSSDS KSHVATMGAG
DFFANEKSVT LSAPTTARIE HVDAEGKTTV LKGGLKLLEG EVIDGTFMSK KALIAFLEEQ
VADAKKAGVL FSLHMKATMM KVSDPIIFGH AVRVFFAELF ETQGAALDKL GFDPNNGLGT
LTSSLAQLSD DERKAIESTL ESIYKERPAM AMVNSDKGIT NLHVPSDVII DASMPAMIRT
SGQMWNADNK TQDTKAVIPD SSYAGVYQEV IDFCKKNGAF DPTTMGSVSN VGLMAQKAEE
YGSHDKTFEV ASAGTVRVVD ENGKVLIEHA VEAGDIWRAC QTKDAPIRDW VKLAVTRARA
TGTPAVFWLD EKRAHDARLI EKVKVYLGEH DTEGLEIKIL SPVEATKFSL ERIAEGKDTI
SVTGNVLRDY LTDLFPILEV GTSAKMLSIV PLMQGGGLFE TGAGGSAPKH VQQFEEEGHL
RWDSLGEFLA LAAALQFLAD KFDNAGARVL GEALDDATTK YLLENRSPSR KVNQIDNRGS
QYYLARYWAE ALAAQSANAE LAARFKPVAE ALAGKEEAIN GELIGAQGKP AHVDGYYFPD
EDLATKAMRP SATYNQILSK I
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