Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1561 |
Symbol | |
ID | 8543943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2128771 |
End bp | 2130033 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646386270 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003266005 |
Protein GI | 262194796 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.224234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCGA GCATCGGAAT CGCCAACACC GTCGAGCGCA GCGAGGTGCA CGCCGGCCAT CGCGCCCCCG CGACTGCCGC CGCGGCGCCC GCGCCCGACA CGGGACCGCC GGCGTCGTTG GTGGCGCTGC TGGCGGCCAG CGCCGGTTTT GCGGTGGCCG CGCTGTACTA CAGCCAGCCG ATCCTGGGCG TGCTGGGCGC GGACCTGGGC GCGTCGGCGA GCACGATGGG CCTCTTGCCG ACGCTCACGC AGCTCGGCTA CGCGCTCGGC ATCTTGTTTC TGGTGCCGCT CGGCGACCGC TGGGACCGCC GCCGCGTCAT CGTGGCCAAG GCACTATTAC TAATGATGGC CCTGGTCGGC GCCGCGCTCG CGCCTTCGAC CGCGTGGCTG CTGGCGGCGA GTCTGGCCAT CGGTCTGTGC GCGACCCTGG CCCAGGACAT CGTGCCGGCG GCGGCGACGC TGGCCCCGGG CGCCAGCCGC GGCCGCGTGG TGGGCGCGAC CATGACCGGC CTGCTGCTGG GGATTCTGCT GTCGCGCGTG GTCGGCGGCG TGGTCGCCGA GGCCTTTGGC TGGCGCGTGA TGTTCGCGGG CGCGGCGCTG AGCATCGCCG CGGTGGCGCT GGCCTCGTGG CTGTGGCTGC CGCGCTTCGC GCCGACTACG ACGCTCGGCT ATCGCGCGCT GCTGGCCTCG TTGTTGGCGC TGTGGCGGCG CTATCCGGCG CTGCGCCGGG CGACCGCGGC GCAGGCGCTC CTGGCCGTGG GCTTCAGCGC GTTCTGGTCG ACGCTGGCCA TCATGCTGCA CGAGCCGCCG TTTGAGCTCG GCAGCGCGGC TGCGGGCGCG TTTGGCATCG CGGGGGCGGC CGGTGCCCTG GCCGCGCCGT TGGCCGGACG CCTGGCCGAT CGCCGGGGAC CGCGCTGGGT CGCGCAGTCC GGCGCGCTCA TCGCCTGCGT GTCGTTTGCG GCCATGTTGC TGGCGCCGCT GGTGTCGCCG CAGATGCAAC TCGGCCTGCT CATGGCGGCC GCCCTGGGCT TTGATCTCGG CATCCAATCG GCCCTCATCG CCCATCAGAC CATTGTCTAT GATCTCGAGT CCGGGGCCCG CAGCCGCCTC AACGCCGTGC TCTTCGTCGG CATGTTCGCG GGCATGGCGG CCGGCGCCGC GCTCGGCGGT GTGGCCCTGG CCCGCTGGGG CTGGCAGGCG GTCGTCGCCC TGGCCGCGCT CACGGCCGGC GGCGCCTACG CGCTGCGCCG CTGGGCGCGC TGA
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Protein sequence | MQASIGIANT VERSEVHAGH RAPATAAAAP APDTGPPASL VALLAASAGF AVAALYYSQP ILGVLGADLG ASASTMGLLP TLTQLGYALG ILFLVPLGDR WDRRRVIVAK ALLLMMALVG AALAPSTAWL LAASLAIGLC ATLAQDIVPA AATLAPGASR GRVVGATMTG LLLGILLSRV VGGVVAEAFG WRVMFAGAAL SIAAVALASW LWLPRFAPTT TLGYRALLAS LLALWRRYPA LRRATAAQAL LAVGFSAFWS TLAIMLHEPP FELGSAAAGA FGIAGAAGAL AAPLAGRLAD RRGPRWVAQS GALIACVSFA AMLLAPLVSP QMQLGLLMAA ALGFDLGIQS ALIAHQTIVY DLESGARSRL NAVLFVGMFA GMAAGAALGG VALARWGWQA VVALAALTAG GAYALRRWAR
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