Gene Hoch_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1444 
Symbol 
ID8543826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1954635 
End bp1955264 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID646386156 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003265891 
Protein GI262194682 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.87184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCC TCTCACTCAC CGCATTCACC TCGCTCGACG GCGTCGTCCA AGGCCCCGGT 
CACCCCGACG AAGACCGCTC GGGCGACTTC GCCATGGGCG GCTGGGTCAT GCCGCTCTTC
GACGAAGGCG TCGGCAACTT CGTCGACGGC ATCTACAACC GGGCGGGCGC CTTCCTGCTG
GGTCGCAACA CCTATCGCAG CTTCGAAAGC CACTGGCCCA ACGAGCCCAT CGAGGACAAC
GCGGTCGCGC GCATGCTCAA CACCTTGCCC AAATACGTGG CCTCGACGAC GCTCGACAAG
GTCACCTGGG CGCCGTCCGA GATCGTGAGC GATCCCGTGG CCCGCATCGA CGAGCTCAAA
GCCGCGCACG AGGGCGAGCT GCAGGTGCAC GGCAGCCCCA TCCTGGCGCG CAGCCTGCTG
AAGGCCGGCG TGGTCGACGA GCTCAATCTG ATGATGTTCC CCGTGGTCCT CGGCGGCGGC
AAGCGTCTGC TCGAGCCCGG CGCGGTCGCG GCCGGCATGA AGCTGATCTC GCAGGCGAGC
ACCGACAACG GCATCGTGCT GCTGCGTTAT GCGCGCACCG GCCCGGTGCA GATCGGCGCG
ATGGGAGGCG ACGGCCCGGC GCCGGAGTGA
 
Protein sequence
MAILSLTAFT SLDGVVQGPG HPDEDRSGDF AMGGWVMPLF DEGVGNFVDG IYNRAGAFLL 
GRNTYRSFES HWPNEPIEDN AVARMLNTLP KYVASTTLDK VTWAPSEIVS DPVARIDELK
AAHEGELQVH GSPILARSLL KAGVVDELNL MMFPVVLGGG KRLLEPGAVA AGMKLISQAS
TDNGIVLLRY ARTGPVQIGA MGGDGPAPE