| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1266 |
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| Symbol | |
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| ID | 8543648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 1668731 |
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| End bp | 1669705 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646385984 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003265719 |
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| Protein GI | 262194510 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.68316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.012517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG AAGCTGTCGC GCCGCCCGCC GATCTCGCCG TCGCCCGCGA GCAATTCCTG
GCCCTGGTCG ACACGGTACG GCCCGATCTG CACCGCTACG CCTCGCGCCT CGTGGGCTCG
GCCATCGACG GCGAAGACGT GGTGCAAGAC ACCCTGGCCA AGGCCCTGTA CGCGCTCAGC
CAGTCGTCCG AGATACCGCC GCTGCGGCCG TGGTTGTTTC GCATCGCCCG CAACACGGCC
ATCGACCTGC TGCGCCGCTA CGAGCGCAAA CACGCCACCC CGCTACCGCC CGAGGAGCAC
ATGCCGAGCG ACGAGGAACC CCGCGATCCC GAGGTACTGC GCGCCGCCAT CGCCACCTTC
ATGACCCTGC CGCTGAGCCA GCGCAGCGCC GTCATCCTCA AGGACGTGCT CGGCGAGTCG
GTGGACGACA TCGCCGGCCA CCTCGATACC AGCGCGGCCG CGGTCAAGTC GCTGCTGGTG
CGCGGACGCC AGGCGCTCAA AGCGCGCCTG GCCGAGGCCG AGTCGGGGGC CGAGGCGGAC
GCTGGGGCTG CGGCCGCGGA CGCGATGTCG CCCGAGCACC GCGCGCTGGT GCATCGCTAC
GTGGATCTGT TCAATCAGCG CGACTGGGAC GGTGTGCAGG CGCTGTTGCT CGACGAGTGT
CGGCTCGACC TGGTGTCCAA GTCGCAGCGC AAGGGCAAAG CCGTGGGCAT GTATTTCGGA
CGCTATGCCC AGGAGCGCGA GCTGCTGTTT CGCGCCGGAC GCTGCGAGGG ACGCAGCGCC
ATCGGCGTGT TTCGCCGGGC CGAGGCCAGC GCCGAGAGCG GGGCCGCGAG CCGGGCCGCT
AGCGGCGCCG AGACCCTGGT CTACATCATC CTGCTCGAGA GCGAGGACGG CCGCGTGAGC
TTCATCCGCG ATTTCCGCTA CGTGCCCTAT CTCGCCGGCG AGCTCGACTT CGTGGCCGAC
GCCGCTCACT CGTAG
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| Protein sequence | MSTEAVAPPA DLAVAREQFL ALVDTVRPDL HRYASRLVGS AIDGEDVVQD TLAKALYALS
QSSEIPPLRP WLFRIARNTA IDLLRRYERK HATPLPPEEH MPSDEEPRDP EVLRAAIATF
MTLPLSQRSA VILKDVLGES VDDIAGHLDT SAAAVKSLLV RGRQALKARL AEAESGAEAD
AGAAAADAMS PEHRALVHRY VDLFNQRDWD GVQALLLDEC RLDLVSKSQR KGKAVGMYFG
RYAQERELLF RAGRCEGRSA IGVFRRAEAS AESGAASRAA SGAETLVYII LLESEDGRVS
FIRDFRYVPY LAGELDFVAD AAHS
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