Gene Hoch_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1239 
Symbol 
ID8543621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1628712 
End bp1629341 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID646385959 
Producthypothetical protein 
Protein accessionYP_003265694 
Protein GI262194485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00668212 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC AACCGCACGC TTTCATACTC TTCTGGGATA TGGACCATCT CAAGGACTCC 
GGGCGCGACG CCATGATGAC GCCGTTTGAG GGGTCAGAGC GCGTCGCAGG ATGGGTTCAT
CCTCGACCGC TCGATTTGCC CGCGCCGATC GAGTTCGAGG CGAATTTTCC GGTCATCGCA
CGCAGCGACT ATCCCAGCAA CAACGCCGGC TGGCCGCTGA TGTCGCCGCG GATGCTGGCG
GTTCTCGGCC AGTTGGGCGA TATACCGCAT CGCCGGATCC CCGTGCGCAT GCTCGATCGC
ATGGCGTTTG CCGACAAGCG GTACATGCCC GACGGCAGCC TACGGCCAGA GGCGGTGGAT
GAGCGCTTCG TCGCCGTGCA GCTCAGCGAA CATATCGACG CAGTCGACTG GGAACACAGC
AAATGCGAGA TGAGCACGAT CGACAGCTCT CGCGTGAGCT ACTTCGAACG CCTGGTGCTG
GCTCCGCCCG ATGCGGGCCT ACCGCCGCTG TTTCGCCTCC GCGCCAAGCC GAGTCATCTG
CTCGTGTCCG CGCGCGCGCG CCACGCACTG GAGGATGCCG GCATCCGCGG CGTGTCGTTC
CAGTCTCTGC CCGGCGCAGA AACTACATAG
 
Protein sequence
MTQQPHAFIL FWDMDHLKDS GRDAMMTPFE GSERVAGWVH PRPLDLPAPI EFEANFPVIA 
RSDYPSNNAG WPLMSPRMLA VLGQLGDIPH RRIPVRMLDR MAFADKRYMP DGSLRPEAVD
ERFVAVQLSE HIDAVDWEHS KCEMSTIDSS RVSYFERLVL APPDAGLPPL FRLRAKPSHL
LVSARARHAL EDAGIRGVSF QSLPGAETT