Gene Hoch_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0554 
Symbol 
ID8542934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp746813 
End bp747838 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID646385348 
Productaldo/keto reductase 
Protein accessionYP_003265085 
Protein GI262193876 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.243293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATC GGAATCTGGG CGCCAGTGGC TTGAAGGTCT CCACGCTGTG TCTGGGCGCC 
ATGACCTTTG GCGAAGCCGA CGAAAGCTCG TTCATGCACA ACGTGAGCTG CGACGAGGAG
ACCTCGTTTC AGATCATGAA TCGCGCCCTC GACCTGGGCG TGAACTTCAT CGATACGGCC
GACGTGTACG GCCAGGGCGG CCTCTCCGAG CGCGTCATCG GCAAGTGGTT CGCGCAGGAC
GGACGCCGCG ACGAGGTCGT GTTGGCGACC AAGTTTCGCT TCCGCATGGG CCAGGGCCCC
AACGGCACCG GCGCCGCCCG CTACCGCATC GTCAAGACCG TGGAGGACAG CCTGCGCCGC
CTCGGCACCG ACCGCATCGA TCTCTATCAG ATCCACATGC AGGACATCGA CACGCCCGAG
GAGGAGACCC TGCGCGCGCT CGACGACCTG GTGCGCCAGG GCAAGGTGCT CTACCTCGGC
TGCAGCAACT ACGCCGCCTA CCGCCTGGTC CACAGCCTGT GGACCAGCAA GACCCAGCTC
CTCGAGCGCT TCGTGGCGCT GCAGGCGCAG TACAGCCTGG TGGTGCGCGA CCTCGAGCGC
GAGCACGTGC CGGTGTGTCG CGATTTCGGC CTCGGCATCC TGCCCTGGTC GCCGCTCGCC
GGCGGCTTCC TCACCGGCAA GTACCACAAG GACCAAGAGC CGCCCGAGGG CAGCCGCCTC
GAGACCTGGA AAGATCGCTA CGCCGGCTTC GACAGCCCGC GCAACTGGCG CATCCTCGAG
GCCGCCGAGA AGGTCGCCGG CGAGCTGAAA GCCTCTGTGG CCCAGGTGTC GCTGGCGTGG
CTGCTCAGCA AGCCCACCGT GAGCTCGGTG ATCTTTGGCG CGCGCACGGT CGAGCAGCTC
GAGGACAACG TCAAGGCCGC CGAAGTGACG CTGAGCGCCG AGCAGGTGGC CGCGCTCGAC
GAGGCCTCGG ACTTCGACCT CGGCTATCCC TACCAATTCC TGGGCAACGT CCAGAGCCGC
TGGTAG
 
Protein sequence
MEYRNLGASG LKVSTLCLGA MTFGEADESS FMHNVSCDEE TSFQIMNRAL DLGVNFIDTA 
DVYGQGGLSE RVIGKWFAQD GRRDEVVLAT KFRFRMGQGP NGTGAARYRI VKTVEDSLRR
LGTDRIDLYQ IHMQDIDTPE EETLRALDDL VRQGKVLYLG CSNYAAYRLV HSLWTSKTQL
LERFVALQAQ YSLVVRDLER EHVPVCRDFG LGILPWSPLA GGFLTGKYHK DQEPPEGSRL
ETWKDRYAGF DSPRNWRILE AAEKVAGELK ASVAQVSLAW LLSKPTVSSV IFGARTVEQL
EDNVKAAEVT LSAEQVAALD EASDFDLGYP YQFLGNVQSR W