| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0549 |
|---|
| Symbol | |
|---|
| ID | 8542929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 741165 |
|---|
| End bp | 742460 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646385343 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003265080 |
|---|
| Protein GI | 262193871 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.251603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGCA AAGAAGTCAA CGAGCACAGC CCGCTGCGCA TTCTCGACAA GTCGATCCAT
GGCGGCTTGG GCAAGGGCAA TCTCGGTGTG GTCATGGCCC GCGCCGGCGT GGGTAAGACA
GCGTGCCTGG TGCAGATCGG GCTCGATGAC CTCATGCGCG ATCGCCCGGT CCTGCACCTC
ACGCTCGAGC AGAGCGTCGA GCACGTGCAG TCCTGGTACG ACGCCTTGTT TGACGACCTG
GCGCTGCAGA ATGACCTCGA AGACCAGGAG TCGGAGCGCG CCCGCCTCGC GGCTCAGCGA
CTGATCTACT CCTTCTCGGA CCACGAGCTG TGGCCCGAGC GTCTGGAGAA GACGGTCGCG
ATGTTCAAGA AGCACCTCGA CTTCGACCCC GCTGCGATTC TGGTGGACGG CTACGACTGG
GCCGCGCACA GCGTGACCGA GAACGCGGCC ATGATCGGCG CCTTCAAGGC CTACGCCAAG
ATGCTCGGCG CCGAGCTGTG GATGACGGCG CAGACCCATC GCGAGGGCAC CGGCGACCAC
CCCAACAAGG TGCCGCCGCC GTGCGACGCG TACGCCAACC TCATCGATGT GGCCGTGTTC
CTCGAGCCCC ACGGTGAGCT GGTGGCGCTG CGCCTGCTCA AGGACCACGG CAACGCCGCG
CCCCACGATA CCCGCCTCAA CCTGCACCCG GACACCCTGC GTCTGGCCGA CAGCGAGGAC
AAGAACCGCA ACCCGCGCAT GCCGCCGAGC GCCTTTACGC TGCTCTCGGG CGGTGCGGAA
GGCGCCGAGG CCTGCTTCGG TCGCTGCGCC GAGAAGTGGG GCCTGATGGA GCTCAACTTC
AGCTTCGACG GCCGCACGCC CAAGCGCACC CGCGGACTGG TCCGGCTCAG CGACGCCGAG
CTGGCTCAGG GCGCCGTGAG CCAGGTGTAC ATGGAAGCGC ACATGCATCG CAGCTACCCG
GCGACGCCGC TCTTCCAGAA GACCCTGCAG AGCATCTGGC ACCAGGTGAA CACCGCGCAA
GAGGTGTTCA CGGTCGGCGT GCTGCTCGAG GACGGCACCG TCAAGGGCGG TACCGGCTGG
GCGGCCGAGC TGGCGCGGGT GTGGAACAAG CCGGTGTACG TGTTCGATCA GGAGCGCAAC
GCCTGGTTCT CGTGGCAGGA GAAGGAGTGG GTGAAGGAGG ACGCGCCGGT GATCAAGGCG
CGCCGCTTCA CCGGCACGGG CACCCGCTAT CTGTCCGACC AAGGCCGCGC CGCCGTCGAG
GAGCTGTTCG AGCGCTCCTT CGGCAAGCAG AGCTGA
|
|---|
| Protein sequence | MYRKEVNEHS PLRILDKSIH GGLGKGNLGV VMARAGVGKT ACLVQIGLDD LMRDRPVLHL
TLEQSVEHVQ SWYDALFDDL ALQNDLEDQE SERARLAAQR LIYSFSDHEL WPERLEKTVA
MFKKHLDFDP AAILVDGYDW AAHSVTENAA MIGAFKAYAK MLGAELWMTA QTHREGTGDH
PNKVPPPCDA YANLIDVAVF LEPHGELVAL RLLKDHGNAA PHDTRLNLHP DTLRLADSED
KNRNPRMPPS AFTLLSGGAE GAEACFGRCA EKWGLMELNF SFDGRTPKRT RGLVRLSDAE
LAQGAVSQVY MEAHMHRSYP ATPLFQKTLQ SIWHQVNTAQ EVFTVGVLLE DGTVKGGTGW
AAELARVWNK PVYVFDQERN AWFSWQEKEW VKEDAPVIKA RRFTGTGTRY LSDQGRAAVE
ELFERSFGKQ S
|
|---|
| |