Gene Hoch_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0547 
Symbol 
ID8542927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp736863 
End bp738899 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content74% 
IMG OID646385341 
Productserine/threonine protein kinase 
Protein accessionYP_003265078 
Protein GI262193869 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCCG CCCTGGCGCG CGCGCAACGC CTCACTGTCG CAGAATTGTT ACGGGTCCCC 
GGCACAGGCG CGGTACCCTG GGTGAGCGTG CGCTCACCCG CTCGGCATAG CATCTCCGGG
CCCGATGGCG AAAGTGTCTC GATCGCATTG GAGTCGTCGG ATGAGTGTAT TGGTGCCAAC
ACAGCGGTAG CCTTCCTGGA CGGCGAGCTG TCGCTTGAGG AAGCCGACGC GGTCGAGGCT
CACGCCGCGC ACTGCGAGGA GTGTCGGCAG CACCTGGCCG CGCTGAGCGC CAGCGATTCG
CAGGCCGACC TGGTGCCGAC CTCGCCGCTC GGCGCCGAGG GGCACCTGAT CCTCGAGCGC
GGCGAGAAGG TCGGCCGCTT CGAGGTGCTC GGCCGCCTGG GCACCGGCGG CATGGGCGTG
GTGTGGTCGG CCTACGACCG CCGGCTCGAG CGCAAGGTCG CGCTCAAGCT GCTGCGCAGC
CCCAAGGACG GCGGCGTCGA GGCCGAGTCC GCACGCCTGC GGCTGCTGCG CGAGGCCCAG
GCCATGGCCC GGCTGTCGCA CCCGGGCGTG ATCTCGGTGT ACGACGTCGG TACCTACAAA
AACGAGGTGT ACATCGCCAT GGAGCTGGTC GAGGGCGACA CCTTGACCCG CTGGCTGAGC
CGCTACGAGC GCCCCTGGCA GGACATCCTG GGCAAGTTCC TCGAGGCCGG CACGGTGCTC
GCCGAAGCCC ACGTCGGCGG CCTACTGCAC CGCGACTTCA AGCCCGACAA CGTGCTCGTC
GGCAGCGACG AGCGCGTGCG CGTGATGGAT TTCGGCCTGG CCCGCTCGCT GCTCTTCGAC
GCCCCGCTCG AGGCCGGCGA AGGCGCCTCG GTCGCGCAGC CGCCGAGCAA CATCCTGGGC
CACCCGCTCA CGCGCACCGG CATGCTGGTG GGCACGCCGC GGTACATGGC GCCCGAGCAG
TTCGCGGGCC GCGACACCGA CGCGCGCACC GATCAATTCA GCTTCTGCGT GGCCCTGTAC
GAGGCCCTGT ACCGGCGCCA TCCCTTCGAG GGCGAGCACG CGGCCGCGGT CACGGCCGAG
ACCGAGGTGC CGCCGCCGCC CGCGGGCAAC GCCGCCCCGG CCTGGCTGCA CACGGCGCTG
GTCCACGGCC TGGCCCACGC GCCCGGCGAG CGCTTCCCCA CCATGCAGGC GCTGCTGCGC
GCGCTGGCGC CGCCGCCGCC CCGGCCCTCG CCGCTGCGCC GCGCCTGGCC CGCGGGCGTG
CTGCTGGCCC TGGCCCTGGC CGCCTACGCC TTCGCCGCCT GGAGCACGGC GCTGGGCGAC
AACGCCCGCC TCGGCGGCGA GGTCGCGGCC GCGCAGGGAC GCATCATCGA ACTCGAACGC
GACATCGGCG AGATCCTCGA GCTGGTGTCC GAGCTCGAGG GCCGCGCCGG CGAGCGCGAG
GATCTCATCG CCGAGCTCGA GCAGCGCCTG GCCGCGGCCG GCGGCGAGCT CGAGCAGGCC
CGCGCCGCGC TCAGCGAATC GCGCGCGCCG GCCGCGGCCG CGCAGTCCAT CTCGTCCGCG
CAGCCCGTGC GCGCCCCGCG CTCGGAGCCA CCGGCCGCCA TCTCGCAGCC GCCACCCGCG
CCCGTGGGCC TGAGCCGCGG CCAGCTCATG GCGCCGCTCG AGCAGGTCCA CCGCGACCTC
GCCGTGTGCT TCCGCGAGTG GCTCGAGCGC TCGCCCGACA CCCGCCTGCT GCTGGGCATG
CGCGTGCGCG TCGAGCCCTC GGGCGCGCCC GCGCTCGACA AGGTCGCCGG TCTCGCCGAC
CCGGTGCTGC GCGCGTGCGC CTCGGGCAAC CTGCTGCGCC TGCGCTTCCC GGCCGCCGAG
GCCGTGACCC TGGCCGATTA CAAGTTCTAC GGCTCCACCT CGGGCGGGCT GTTCACGCGC
GTCGACGTCG TCGCCGCGCT GCCGCCCGAG CCCGATGACA CCGCCGAGTT CGACGAGTCT
CCAAGCGCCA TCGAATCCTC GGCAGCGGGC GCCGGCAGCC GCTCGCTGGC GCCCTGA
 
Protein sequence
MRAALARAQR LTVAELLRVP GTGAVPWVSV RSPARHSISG PDGESVSIAL ESSDECIGAN 
TAVAFLDGEL SLEEADAVEA HAAHCEECRQ HLAALSASDS QADLVPTSPL GAEGHLILER
GEKVGRFEVL GRLGTGGMGV VWSAYDRRLE RKVALKLLRS PKDGGVEAES ARLRLLREAQ
AMARLSHPGV ISVYDVGTYK NEVYIAMELV EGDTLTRWLS RYERPWQDIL GKFLEAGTVL
AEAHVGGLLH RDFKPDNVLV GSDERVRVMD FGLARSLLFD APLEAGEGAS VAQPPSNILG
HPLTRTGMLV GTPRYMAPEQ FAGRDTDART DQFSFCVALY EALYRRHPFE GEHAAAVTAE
TEVPPPPAGN AAPAWLHTAL VHGLAHAPGE RFPTMQALLR ALAPPPPRPS PLRRAWPAGV
LLALALAAYA FAAWSTALGD NARLGGEVAA AQGRIIELER DIGEILELVS ELEGRAGERE
DLIAELEQRL AAAGGELEQA RAALSESRAP AAAAQSISSA QPVRAPRSEP PAAISQPPPA
PVGLSRGQLM APLEQVHRDL AVCFREWLER SPDTRLLLGM RVRVEPSGAP ALDKVAGLAD
PVLRACASGN LLRLRFPAAE AVTLADYKFY GSTSGGLFTR VDVVAALPPE PDDTAEFDES
PSAIESSAAG AGSRSLAP