Gene Hoch_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0492 
Symbol 
ID8542872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp669339 
End bp670547 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content71% 
IMG OID646385288 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003265025 
Protein GI262193816 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CGTATCTGGT CGATGGCTTG CGCACTCCTT TCGGTCGCCA CGGCGGCGCC 
CTGGCCTCGG TCCGCGCCGA CGACATGGCC GGGCACGTGA TCGCCAAGCT GGTCGAGCGC
ACCGGTGTGC CGCCCGACCG CATCGACGAC GTGATCTTCG GCTGCGCCAA CCAGGCCGGC
GAGGACAACC GCAACGTCGG CCGCATGGGC GCCCTGCTCG CCGGCCTGCC GGTGTCGGTC
CCGGGCGTCA CCGTCAACCG CCTGTGCGGC TCGGGCATGC AGGCCTTCGC CGACGCCGTC
CGCCAGGTCA TGCTGGGCGA GGCCGACCTG ATCATCGCCG GCGGCGTCGA GCAGATGACG
CGCGCGCCCC TGGTCATGCC CAAGAGCGGC GCCGCCTACG CGCGCGGCAA CCAGACCCTG
TTCGACACCA CGCTGGGCTG GCGCATGGTC AACCCGCGCA TGGACGCCAT GCACGAGACC
CTCGGCCTGG GCATGACGGC CGAGCGCGTG GCCGAGCGCG AGGGCATCAG CCGCGAGGAG
CAGGACGAAT TCGCCTTTGC CTCGCAACAG CGCGCCGGCC GCGCCCTGGC CGAGAAGCGC
CTGGAGCGCG AGCTCGTCCC CATCGTCACC GGCAAGAACC GCAAGACCGG CGAGGAATAC
ATCTGCGCCG AGGACGAGCA CCCGCGCCCC GAGGTCACGC TCGAGAAGCT CGGCAAGCTG
CCGCCGGTGT TCGCCAAAGA CGGCACGGTC ACCGCCGGCA ACGCCTCGGG GATCAACGAC
GGTGCCGCCG CCATGCTGGT CGCCAGCGAG GCCGCGGTGA AGGAGTTCGG CCTGCGCCCC
CTGGCCCGCT ACGTGTCCTG GGGTGTCGCC GGCGTGGCCC CGAGCTACAT GGGCCTGGGC
CCGATCCCGG CCTCGCGCAA AGCCTTCGAA CGCGCCGGAC TCAAGGCCGC CGATATCGGC
CTCGCCGAGC TCAACGAGGC CTTCGCCGCG CAGGCTATCC CGTGCGTGCG CGGCCTCGAA
CTCGACCCCG AACGCGTCAA CGTCAACGGC GGCGCGATCG CCCTCGGACA CCCGCTCGGC
GCCTCGGGAG CGCGAATCGT ACTCACCCTC ATGCACGAGC TAAAGGCTCG AAATGAGCGC
TATGGACTTG CCTCCATGTG CATCGGCGTC GGCCAGGGAA TAGCCACCAT CATCGAATGC
GTGGCCTAG
 
Protein sequence
MSTAYLVDGL RTPFGRHGGA LASVRADDMA GHVIAKLVER TGVPPDRIDD VIFGCANQAG 
EDNRNVGRMG ALLAGLPVSV PGVTVNRLCG SGMQAFADAV RQVMLGEADL IIAGGVEQMT
RAPLVMPKSG AAYARGNQTL FDTTLGWRMV NPRMDAMHET LGLGMTAERV AEREGISREE
QDEFAFASQQ RAGRALAEKR LERELVPIVT GKNRKTGEEY ICAEDEHPRP EVTLEKLGKL
PPVFAKDGTV TAGNASGIND GAAAMLVASE AAVKEFGLRP LARYVSWGVA GVAPSYMGLG
PIPASRKAFE RAGLKAADIG LAELNEAFAA QAIPCVRGLE LDPERVNVNG GAIALGHPLG
ASGARIVLTL MHELKARNER YGLASMCIGV GQGIATIIEC VA