Gene Hoch_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0422 
Symbol 
ID8542802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp581579 
End bp582322 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID646385219 
ProductDolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_003264956 
Protein GI262193747 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.264242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTG AACACAGCGG CGCTGGCGCC CTGATCTGCA TTCCCACCTA CAACGAGGCC 
GAGAATCTGC CGCTCATCGT GCCCGCGGTG CTCACCGCGG TGCCCGAGGC TCACGTGCTG
GTGATCGACG ACGCCTCGCC CGACGGCACC GGCCAGATCG CCGACGCGCT GGCCCGCGAC
AGCGAGCAGG TGCACGTGCT GCATCGCGCC GGTAAAGAGG GCCTGGGACG CGCGTACCTG
GCCGCCTTCG AGTGGGCGCT GGCCCGCGAC TACCGCTTTG TGTTCGAGTT CGACGCCGAC
TTCTCGCACG ACCCCGGGTA TCTGCCCGGC TTCGTCGCGT TGCTCGAGGA CGAGGCCGAC
GTGATCGTGG GCTCGCGCCG CATCCCGGGC GGCGGGGTCG AGAACTGGGG CGCGCTGCGC
CGCTTCGTGT CGTGGGGCGG GAGTATGTAC GCGCGTACGA TTTTGGGCGT GCCGGTGCGC
GACCTCACCG GCGGCTTCAA CGGCTTTCGC CGCGAGGCGC TGGCCGGGCT CGGTCTCGAG
GACGTGAGCA GCACCGGCTA TTGCTTTCAG ATCGAGCTCA AATACCGGGC GCTCAAGCGC
GGTTACCGCG TGCTCGAGCA GGCCATTGTG TTCCCCGACC GGGTGCGCGG CGTGTCGAAG
ATGAGCGGCG AGATCTTCCT CGAGGCCGTG CGCCAGGTGT GGAAGCTGCG CCTGCGCGAA
GACGAGATCC GCGGCGCCGA GTGA
 
Protein sequence
MSLEHSGAGA LICIPTYNEA ENLPLIVPAV LTAVPEAHVL VIDDASPDGT GQIADALARD 
SEQVHVLHRA GKEGLGRAYL AAFEWALARD YRFVFEFDAD FSHDPGYLPG FVALLEDEAD
VIVGSRRIPG GGVENWGALR RFVSWGGSMY ARTILGVPVR DLTGGFNGFR REALAGLGLE
DVSSTGYCFQ IELKYRALKR GYRVLEQAIV FPDRVRGVSK MSGEIFLEAV RQVWKLRLRE
DEIRGAE