| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0416 |
|---|
| Symbol | |
|---|
| ID | 8542796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 573987 |
|---|
| End bp | 575195 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646385213 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003264950 |
|---|
| Protein GI | 262193741 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.875248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.906322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATA CATCTGCTTA CACCTTGACG GTTCGCCCCG GGCATCCCGA CTTCTCGGAG
CTGCCCTGGC AGCACGCGCT GGCCACCTGG GATGTCGCGG CCTTGGTGCC GCGGCCCGCG
GGTCGCTCCG AGCACGCGGT GCGCTACCTG TGCTTTGGCG ACGCCGTGTA CGTGATCAAA
GAGCTGCCCA CGCGCACGGC CCATCGCGAG TACGAGCTGT TGCGCGCGCT CGAGGACGAG
GGCCTGCTGG TGGCGCCGCC GGTGGGTCTG GTCGAGGGCC GCTGCGGCGA CCCCGAGGCC
GAGCACTCGG CGGCCCTGAT CACGCGTTAC CTGCCGTTTA CCTACTCGTA TCGCGAGCTC
ATCGCGCAGG CGGGCCTGGC CACGGTGCGC GCCGGCCTGC CCGATGCCTT TGCCGGACTG
CTGGTCGAAT TGCACAGCGC CGGCTGCTTC TGGGGCGATT GTTCGCTGTC GAACGTGCTC
CTGCGCCGCG ACGCCGACGG CATCGATACG GTCATGGTCG ACGCCGAGAC CGCGTTCTTG
TGCGAGCGGC TCAGCGATCG CCAGCGCGCG GCCGATCTCG TCATCCTGGT CGAAAACGTC
AACGCCGCCA TGATCGAGCT GGCGGCCGCG CGTGGCGACG CCGCGCTCGA CGCGACGCTC
GACACCGCGC TGGGGCTGGG CGGCGAGATC GTCGCGCGCT ACGGGCAGCT CTGGAGTGAG
CTATTTGGCG CCGAGATCAT CGCGCCCGGC GAGGAACACA AGATCGCCGC GCGCATCGAG
CGCGTGCACG CGCTCGGCTT CGACGTCCGC GAGCTCGACA TCGAGACCGC GGACGACGGC
GTCACCCGCA CCCTGCGCCT GCGCCCGGGG CGCCGGCATT TTCACGCCCA GCGCCTGGAG
CAGCTCACCG GCGTCGAGGT CGCCGAGCGC CAGGCCCGCC AGCTCCTCAG CGACCTCGCC
TACTACCGCA GCCTGCGGCA CAGCTCAGCG AGCGCGAACG AGGCCCTGGC CGCGCTCGAG
TGGCGGGCCT TTGCCTTTGA GCCCATGCTC GAGCGCATCC GGGCCATCCC GGGCGTGGTC
GATCCGGTGC AGGGCTACTG CGAGCTGCTC GTGCACCGCT ATCTGTGCTC CGAGGCCCGC
GGCGACGACG TCGGCACCGA CGCCGCCTTC GAGGACTGGC AGCGCTGCCT GGTGCCGCGC
GCCGCCTGA
|
|---|
| Protein sequence | MSDTSAYTLT VRPGHPDFSE LPWQHALATW DVAALVPRPA GRSEHAVRYL CFGDAVYVIK
ELPTRTAHRE YELLRALEDE GLLVAPPVGL VEGRCGDPEA EHSAALITRY LPFTYSYREL
IAQAGLATVR AGLPDAFAGL LVELHSAGCF WGDCSLSNVL LRRDADGIDT VMVDAETAFL
CERLSDRQRA ADLVILVENV NAAMIELAAA RGDAALDATL DTALGLGGEI VARYGQLWSE
LFGAEIIAPG EEHKIAARIE RVHALGFDVR ELDIETADDG VTRTLRLRPG RRHFHAQRLE
QLTGVEVAER QARQLLSDLA YYRSLRHSSA SANEALAALE WRAFAFEPML ERIRAIPGVV
DPVQGYCELL VHRYLCSEAR GDDVGTDAAF EDWQRCLVPR AA
|
|---|
| |