| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0357 |
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| Symbol | |
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| ID | 8542737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 496037 |
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| End bp | 496894 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385154 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003264891 |
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| Protein GI | 262193682 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.772817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGT CCCAGAACTC CCCCCAACCC GACGAGCGTC TCCCCCGCAC CAAAACGCTG
CCCCTGCTGC GCGGCCAGAA AGCCCTGGTC AGCGGCGGCA GCTCGGGCAT CGGCGAGGCC
GTGGCCATCG CGCTGGGCGA GGCCGGCGCC GACGTCGTGG TCAACTACCG ATCGCACCCG
GAGCAGGCCG AGGAGGTCGC CGAGCGCATC CGGGCGAGCG GCAGCCAGGC CATCACCGTG
CAAGCCAACG TCGCCGAGGA AGACCAGGTC GAGACCATGT TCCAGACCAT GTTCGAGCGC
TTCGGCACCA TCGACATCCT GGTGAGCAAC GCCGGCCTGC AGCGCGACGC CGCGTTCGAC
GAGATGACGC TCGACGACTG GAAGCTGGTG CTCGACGTCA ACCTCACCGG CCAGTTCCTG
TGCGCGCGCG CGGCCGTGCG CGAGTTCAAG CGGCGCGGGG TCAAGCCCGA GGTGTCGTGC
GCGGCCGGCA AGATCCTGTG CATGAGCTCG GTGCACGAGG TCATCCCGTG GGCCGGACAC
GCCAACTACG CGGCCAGCAA AGGCGGCATC ATGCTGATGA TGAAGAGCCT GGCGCAGGAG
GTCGCGCCCG CGCGCATCCG GGTCAACAGC ATCGCGCCGG GCGCCATCCG CACGCCCATC
AACCGCGACG CCTGGGAGAC CGAGTCCGCG CGCAAGGAGC TGCTCGAAAA GATCCCCTAC
GATCGCATCG GCGAGCCCGA GGACATCGGG CGCGCGGCCG TGTGGCTGGT CTCGGACCAG
GCCGACTACA TCACCGGCCA CACCCTGGTG GTCGACGGCG GCATGACCCT GTATCCCGAC
TTCGCCCACG GCGGCTGA
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| Protein sequence | MAQSQNSPQP DERLPRTKTL PLLRGQKALV SGGSSGIGEA VAIALGEAGA DVVVNYRSHP
EQAEEVAERI RASGSQAITV QANVAEEDQV ETMFQTMFER FGTIDILVSN AGLQRDAAFD
EMTLDDWKLV LDVNLTGQFL CARAAVREFK RRGVKPEVSC AAGKILCMSS VHEVIPWAGH
ANYAASKGGI MLMMKSLAQE VAPARIRVNS IAPGAIRTPI NRDAWETESA RKELLEKIPY
DRIGEPEDIG RAAVWLVSDQ ADYITGHTLV VDGGMTLYPD FAHGG
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