Gene Hoch_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0274 
Symbol 
ID8542653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp402274 
End bp404604 
Gene Length2331 bp 
Protein Length776 aa 
Translation table11 
GC content70% 
IMG OID646385070 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 
Protein accessionYP_003264808 
Protein GI262193599 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.507312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACC GCTACGCAGA CGAGGTCTTC GCCCAGCTCT ACCCGCATAT GGCGCACGGC 
GCTGGGCCTT CTGAATCCTT CGAGTCGGCG CCTGCGCCCG CGGGTGGCGG TCTGAGCCGA
CGCAGCTTCT TGCGCATCGG CGGCGCGGCC GGCGGCGGTC TGTTGATCGC GGTGTCGCTG
GGCGCGTGCA AGGACAAGCC GGCGACCACC GGCGAGCAAC CGAGCGAGCA GCCGAGCGAG
GACCCGAGCG GGCCCTTCGA GGCCAACGCC TTCGTGACCA TCGAGCCCGA GGGCACCGCC
AAGATCACGG TCGCCAAGTC GGAGATGGGC CAGGGCGTGC GCACCACGCT GGCCATGATC
GTGGCCGAGG AGCTGGATCT CGACTGGGCG CGCGTGCGCG TCGAGCAGGC GCCCGGCGAC
GGCGAGACCT ACGGCAAGCA GGGCACCGGC GGCAGCGGCA GCGTGCGCGA CGGCTGGATT
CCGCTGCGCG AGGCCGGCGC CAAAGCGCGC GCCATGCTCG TGGCCGCGGC GGCCAAGAAG
TTCGGCGTCG ACGCCGGCGA GCTGAGCACC TCGGCGAGCA CCGTGCGCCA TGAAGCCTCG
GGGCGCTCGC TCGGTTACGG CGAGCTGGCC GGGCTGGCGG CGCAGGAGAG CGTGCCCGAC
TCGGTCACCT TCAAGAGCGC GTCCGAGTAC ACGCTGCTCG GCAAAGAGCA TCCCGGCATC
GACGTCCTCG ACATCGTCCA GGGCAAGGCC GTCTACGGCA TGGACCTGCG CAAGCCCGAC
ATGCTGTACG CCTCGATCGA GCGCAGTCCG ATTTTCGGCG GCACGGTCAA GAGCGTCGAC
AGCGAGGCCG CGATGGCGGT CCCGGGCGTG GTCAAGGTGG TCGAAATCCC GGCCCAGGGT
GGCGATATCA AGGTCGCCAG CGGCGTGGCC GTGATCGCCA AGAACACCTG GGCGGCCATG
AAGGGGCGCG AGCAGCTCGC GGTGGAGTGG AATCCGGGCG AGCACGCCGA GGAATCGAGC
GACGGTTACC TGGGCCAGAT GCGCAAGAGC ATCGCCAAGC AGGGCGAGTT CGAGGTCAAC
AAGCTCGGCG ACCCCGAGGC CCAGATCAGC GCCGGCGCGG TGGCGCTGCG CGCGCGCTAC
GAGGTGCCCT TCATCGCCCA CGCGACCATG GAGCCCATGA ACTGCACGGC GCTGGTGGAC
GGCGAGCGCT GCCAGCTCTG GGGGCCGATG CAGTTCCCCA ACTGGGCGCG CGGAGCCGCG
GCCAAGGTTC TCGGCATCCC GGTCGAAAAG GTCAGCGCTG AGATCACGCT GCTCGGCGGC
GGCTTCGGTC GCCGGATCAA TCCCGACGTC GCGGTCGAGG CCGCCCTGGT CGCCAAGGAG
GTCGAGGGGC CGGTCCCGGT GCAGGTGCTG TGGAGCCGCG AAGACGATAT GCAGCACGAT
TTCTACCGGC CCATCGCCGT GCACGAGATC GAGGCCAGCC TGGACGCCGA GGGCGCGCCC
CTGGCCTGGC GTCACCGCAT GTCGACGCCC GCGATTCGCG CCACCATCGC CGCCGAGGCC
GAGATCGAGG ATCTGGCCGT GGGCGAGAGC AACGGCGCCA GCGACATGCT GTACCGCATT
CCCAACCGCT CGCTCGAGTA CACGCACCAG CCCTCGGGCG TGCACCGCGG CTGGTGGCGC
GCGGTGCACA CCACGCACAC CACCTTCGCG GTCGAGAGCT TTCTCGACGA GCTGGCCGAA
AAAGCCGGGA AAGACCCGTA CGAGTACCGC ATGGGGCTCA TCGACGAGCT CACCGTGTCG
CGGCCGCAGC CCAACAAGGA TTTCCCCTGG GATCCGGCGC GGCTGCGCGG CGTGCTCGAG
CTGGCCGCGA AAAAGGCCGA GTGGGGCAAG GAGCTGCCGC CCGGACACGG CGTCGGCCTC
GCGGTCGGCA TCGATCACCT GAGCTACGGC GCCGAGGTGG TGGAGGTGTC GGTGATCGAC
GGCAAGCTGC GCATCCACAA GGTGGTGTGC GCGGCCGATT GCGGTCCGGT GCTCAATCCC
AACGGCGCGC GCGCGCAGCT CGAGGGCGGC ATCGTCCAGG GTCTGTCCGC GGCGCTCAAG
GAGAAGATCA CGATCACGGG CGGCCGCGTG GATCAGGGCA ACTTCGACAG CTATCCCATC
CTGCGCATCG ACGAAGCGCC GCTGGTGATC GAGTCGTACT TCGTCGAGAC CGACACCCAC
CCGACCGGCC TGGGTGAGCC CTCGGTGCCG CCGATCGCGG CGGCGCTGGC CAACGCGATC
TACCGGGCCA CGGGCAAGCG GCTGCGCACG CTGCCGCTGC AGCTCGCGTG A
 
Protein sequence
MSHRYADEVF AQLYPHMAHG AGPSESFESA PAPAGGGLSR RSFLRIGGAA GGGLLIAVSL 
GACKDKPATT GEQPSEQPSE DPSGPFEANA FVTIEPEGTA KITVAKSEMG QGVRTTLAMI
VAEELDLDWA RVRVEQAPGD GETYGKQGTG GSGSVRDGWI PLREAGAKAR AMLVAAAAKK
FGVDAGELST SASTVRHEAS GRSLGYGELA GLAAQESVPD SVTFKSASEY TLLGKEHPGI
DVLDIVQGKA VYGMDLRKPD MLYASIERSP IFGGTVKSVD SEAAMAVPGV VKVVEIPAQG
GDIKVASGVA VIAKNTWAAM KGREQLAVEW NPGEHAEESS DGYLGQMRKS IAKQGEFEVN
KLGDPEAQIS AGAVALRARY EVPFIAHATM EPMNCTALVD GERCQLWGPM QFPNWARGAA
AKVLGIPVEK VSAEITLLGG GFGRRINPDV AVEAALVAKE VEGPVPVQVL WSREDDMQHD
FYRPIAVHEI EASLDAEGAP LAWRHRMSTP AIRATIAAEA EIEDLAVGES NGASDMLYRI
PNRSLEYTHQ PSGVHRGWWR AVHTTHTTFA VESFLDELAE KAGKDPYEYR MGLIDELTVS
RPQPNKDFPW DPARLRGVLE LAAKKAEWGK ELPPGHGVGL AVGIDHLSYG AEVVEVSVID
GKLRIHKVVC AADCGPVLNP NGARAQLEGG IVQGLSAALK EKITITGGRV DQGNFDSYPI
LRIDEAPLVI ESYFVETDTH PTGLGEPSVP PIAAALANAI YRATGKRLRT LPLQLA