| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0264 |
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| Symbol | |
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| ID | 8542643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 391811 |
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| End bp | 393442 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646385060 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_003264798 |
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| Protein GI | 262193589 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.357417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.397727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACG CCATCGCCCA GGTACCAACG CCCCACAACG AACCGGTACT CGGCTACGCC
CCCGGCAGCC CGGAGAAGCA GCGCCTCAAG CAGGCGCTCG CGCGCATCGC CGGCGAGGAG
ATCGAGATCC CCTGCATCAT CGGCGGCGAG CGGGTCGAGA CCGGCACGCT CGAGTCGGTG
GTGATGCCGC ACGATCACGG CCACACCCTG GCCCGCTTCC ACGTCGCCGG CGGGGACGAG
GTCGAGCGCG CCATCCGCGC CGCCCAGGAC GCCAAGCGCG AGTGGGCCAG CATGCGCTGG
GAGTCGCGCG TGGCCGTGTT CCTGCGCGCC GCCGAGCTCT TGGCCGGGCC GCATCGCATG
ACGATCAACG CGGCCACCAT GCTCGGCCAG TCCAAGACCT GCCACCAGGC CGAGATCGAC
GCCGCCTGCG AGTTCATCGA CTTCCTGCGC TTCAACTGCG CCTACGCGCA AGAGCTGTAC
GCGCAGCAGC CGAGCAGCTC GCCCGGCATG TGGAACGCGC TCGAGCTGCG CCCGCTCGAG
GGCTTCGTGT TCGCGCTGTC GCCGTTCAAC TTCACGGCCA TCGCCGGCAA CCTGCCGTGT
GCGCCCGCGA TCATGGGCAA CACCGTGGTG TGGAAGCCCT CGGAGAGCCA GACCCTGGCC
GCGTACTACA CCTATCTGCT GCTCGAGGAG GCCGGTCTGC CGCCGGGCGT GATCAACTTC
CTGCCCGGCC ACGGCCAGGA CGTCGCGCCC CGGGCCATGG CCCACCCCGA CTTCGGCGGC
CTGCACTTCA CCGGCGCGAC CTCGGTGTTC AAGTCGCTGT GGGCCCTGGC CAGCGCCAAC
CTCGACACCT ATCGCTCGTA TCCGCGCATC GTCGGCGAGA CCGGCGGCAA GGACTTCATC
ATCGCCCACC CCTCGGCCGA CGAGGACGCC CTGGTCACGG CCATCGTGCG CGGCGGCTAC
GAGTTCCAGG GCCAGAAGTG CTCGGCGGCC TCGCGCGTGT ACGTGCCCCG ATCGCTGTGG
CAGCGCATCG AGAAGCCGCT GGTCGACACC ATCCAGAGCC TGCGCATGGG CGACGTGCGC
GACTTCCGCA ACTTCCTCGG CGCGGTCATC AAGAAGGACG CCTTTGATCG CCACAGCCAG
GTGCTGGGCG CGGCCAAGAG CGACGCCCGC GTGCGCATCG CGGCCGGCGG CGAGACCGAC
GGCAGCAAGG GCTGGTTCGT GCGGCCCTCG CTGCTGGTGG TCGACGACCC CGGACACACC
AACATGAAGA CCGAGTTCTT CGGCCCCATC GTGTCGCTCT ACGTGTATCC CGACGGCGGC
TTCGACGACG CGCTCGAGCT GGTCGATCAG ACCTCGCCCT ACGGGCTCAC CGGCGCGATC
TTCGCCCGCG ACCGCCGCGC CGTGGACCAG GCCGCGCGCG CGCTGCGCTA CAGCGCCGGC
AACTTCTACG TCAACGACAA GCCCACCGGC GCCGTGGTCG GCCAGCAGCC CTTCGGCGGC
GCCCGCGGCT CGGGCACCGA CGACAAGGCC GGCGCGCCCA TGAACCTCTT GCGCTGGACC
GCGGCACGCA CCATCAAAGA GACATTCGTG CCGCCCACGC ACTACGCCTA TCCGTTCATG
GACGAGGAGT GA
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| Protein sequence | MHDAIAQVPT PHNEPVLGYA PGSPEKQRLK QALARIAGEE IEIPCIIGGE RVETGTLESV
VMPHDHGHTL ARFHVAGGDE VERAIRAAQD AKREWASMRW ESRVAVFLRA AELLAGPHRM
TINAATMLGQ SKTCHQAEID AACEFIDFLR FNCAYAQELY AQQPSSSPGM WNALELRPLE
GFVFALSPFN FTAIAGNLPC APAIMGNTVV WKPSESQTLA AYYTYLLLEE AGLPPGVINF
LPGHGQDVAP RAMAHPDFGG LHFTGATSVF KSLWALASAN LDTYRSYPRI VGETGGKDFI
IAHPSADEDA LVTAIVRGGY EFQGQKCSAA SRVYVPRSLW QRIEKPLVDT IQSLRMGDVR
DFRNFLGAVI KKDAFDRHSQ VLGAAKSDAR VRIAAGGETD GSKGWFVRPS LLVVDDPGHT
NMKTEFFGPI VSLYVYPDGG FDDALELVDQ TSPYGLTGAI FARDRRAVDQ AARALRYSAG
NFYVNDKPTG AVVGQQPFGG ARGSGTDDKA GAPMNLLRWT AARTIKETFV PPTHYAYPFM
DEE
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