Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0232 |
Symbol | |
ID | 8542611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 345809 |
End bp | 346810 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646385028 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
Protein accession | YP_003264766 |
Protein GI | 262193557 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCA CACGCTTTGT GGGCACCGGG CGCAGCGTCC CCGAACGTGC CGTCAGCAAC GAGGAGATCG CGCGCCGGGT TGAGACCTCG GACGAGTGGA TCCGCACGCG CACCGGCATT CGCAAGCGCC ACGTGCTGGG CGAGCACGAG GCCACCAGCG ACATGGCCGC GGCCGCCGGG CGCCAGGCCT GCGAGGCCGC CGGCATCGCG CTCGAGGACA TCGAGTGCAT CGTCGTGGCC ACGACCACGC CCGACATGCC CATGCCCTCG TGCGCCATGC TCACGCAGGC CAAGCTCGGC ATCCGCGGCC CGGCCTTTGA CGTCGCCGCC GCTTGCGCCG GCTTCACCTA CGGCACCACC GTGGTCGACA GCCTGATCCG CAGCGGCCAG TACAAGCGCG TGCTGTTCAT CGGCGCCGAG GCGCTGAGCA AGTTTCTCGA CTGGGACGAC CGCGGCACCT GCATCCTGTT CGGCGACGGC GCCGGCGCCG TGGTCGCGGT CGCCGAGGAG CAGGACGTAC CCGACGGCGA CCCGCGCGCG CGCGGCATCC TGTCCACCTT CCTCGACGGC GACGGCAGCC TGTGGCGCGA GCTCAACATC CCCGGCGGCG GCACCGCGTG CCCGCCCAGC GAGGACAGCC TGGCTCAGGG CCAGCACTAC CTGCGCATGA ACGGGCGCGT CATCTTCAGC CACGCGGTGC GCAACCTCAG CGAGGCCTCC GAGACCGCGC TGGCGCGCGC CGGCCTCAGC ATCGACGACG TCGACCTGGT CATCCCGCAC CAGGCCAACC TGCGCATCCT CGATGCGGTC GCCAAGCGCA CGCGCATCCC GCGCGAGAAG TTCATCGTCA ACCTGGACGA ATACGGCAAC ACCTCGGCCG CCTCGATCCC CATCGCGCTC GACGACGGCG TGCGCAGCGG GCGCATCCAG GAGGGTATGT TGCTCGTGCA CTGCGGACTC GGCGCCGGCC TCACCTGGGG CGCGGTCGTG GTCCGCTGGT AG
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Protein sequence | MIRTRFVGTG RSVPERAVSN EEIARRVETS DEWIRTRTGI RKRHVLGEHE ATSDMAAAAG RQACEAAGIA LEDIECIVVA TTTPDMPMPS CAMLTQAKLG IRGPAFDVAA ACAGFTYGTT VVDSLIRSGQ YKRVLFIGAE ALSKFLDWDD RGTCILFGDG AGAVVAVAEE QDVPDGDPRA RGILSTFLDG DGSLWRELNI PGGGTACPPS EDSLAQGQHY LRMNGRVIFS HAVRNLSEAS ETALARAGLS IDDVDLVIPH QANLRILDAV AKRTRIPREK FIVNLDEYGN TSAASIPIAL DDGVRSGRIQ EGMLLVHCGL GAGLTWGAVV VRW
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