Gene Hoch_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0232 
Symbol 
ID8542611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp345809 
End bp346810 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content71% 
IMG OID646385028 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003264766 
Protein GI262193557 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCA CACGCTTTGT GGGCACCGGG CGCAGCGTCC CCGAACGTGC CGTCAGCAAC 
GAGGAGATCG CGCGCCGGGT TGAGACCTCG GACGAGTGGA TCCGCACGCG CACCGGCATT
CGCAAGCGCC ACGTGCTGGG CGAGCACGAG GCCACCAGCG ACATGGCCGC GGCCGCCGGG
CGCCAGGCCT GCGAGGCCGC CGGCATCGCG CTCGAGGACA TCGAGTGCAT CGTCGTGGCC
ACGACCACGC CCGACATGCC CATGCCCTCG TGCGCCATGC TCACGCAGGC CAAGCTCGGC
ATCCGCGGCC CGGCCTTTGA CGTCGCCGCC GCTTGCGCCG GCTTCACCTA CGGCACCACC
GTGGTCGACA GCCTGATCCG CAGCGGCCAG TACAAGCGCG TGCTGTTCAT CGGCGCCGAG
GCGCTGAGCA AGTTTCTCGA CTGGGACGAC CGCGGCACCT GCATCCTGTT CGGCGACGGC
GCCGGCGCCG TGGTCGCGGT CGCCGAGGAG CAGGACGTAC CCGACGGCGA CCCGCGCGCG
CGCGGCATCC TGTCCACCTT CCTCGACGGC GACGGCAGCC TGTGGCGCGA GCTCAACATC
CCCGGCGGCG GCACCGCGTG CCCGCCCAGC GAGGACAGCC TGGCTCAGGG CCAGCACTAC
CTGCGCATGA ACGGGCGCGT CATCTTCAGC CACGCGGTGC GCAACCTCAG CGAGGCCTCC
GAGACCGCGC TGGCGCGCGC CGGCCTCAGC ATCGACGACG TCGACCTGGT CATCCCGCAC
CAGGCCAACC TGCGCATCCT CGATGCGGTC GCCAAGCGCA CGCGCATCCC GCGCGAGAAG
TTCATCGTCA ACCTGGACGA ATACGGCAAC ACCTCGGCCG CCTCGATCCC CATCGCGCTC
GACGACGGCG TGCGCAGCGG GCGCATCCAG GAGGGTATGT TGCTCGTGCA CTGCGGACTC
GGCGCCGGCC TCACCTGGGG CGCGGTCGTG GTCCGCTGGT AG
 
Protein sequence
MIRTRFVGTG RSVPERAVSN EEIARRVETS DEWIRTRTGI RKRHVLGEHE ATSDMAAAAG 
RQACEAAGIA LEDIECIVVA TTTPDMPMPS CAMLTQAKLG IRGPAFDVAA ACAGFTYGTT
VVDSLIRSGQ YKRVLFIGAE ALSKFLDWDD RGTCILFGDG AGAVVAVAEE QDVPDGDPRA
RGILSTFLDG DGSLWRELNI PGGGTACPPS EDSLAQGQHY LRMNGRVIFS HAVRNLSEAS
ETALARAGLS IDDVDLVIPH QANLRILDAV AKRTRIPREK FIVNLDEYGN TSAASIPIAL
DDGVRSGRIQ EGMLLVHCGL GAGLTWGAVV VRW