Gene Hoch_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0208 
Symbol 
ID8542587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp310880 
End bp311191 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID646385004 
Productanti-sigma-factor antagonist 
Protein accessionYP_003264742 
Protein GI262193533 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACA AAAATAGCAT CAAGCGCGAG GACAACGGAG ACGACACCAC GATCTCCATC 
ACCGGCAAGC TCGACGTGCT GACCGCGCCC GAGATGAGCA CGCTCATCGA CGGCCTCGTC
GCCGAGAAGC GCCGCAAAGT AGTCGTCGAT CTCTCCGGAC TCGATCTCAT CGACAGCTCC
GGTGTGGCCG CGCTGGTCGG GATGTACAAG CGCGTCCGCG CCGAGGGCGG CGACGTCACG
ATCCGCGGGA TTCGCGACCA ACCCCTGGCG ATCTTCAAAC TCCTGCGAAT GGACAAGGTG
TTCAACCTCT GA
 
Protein sequence
MSNKNSIKRE DNGDDTTISI TGKLDVLTAP EMSTLIDGLV AEKRRKVVVD LSGLDLIDSS 
GVAALVGMYK RVRAEGGDVT IRGIRDQPLA IFKLLRMDKV FNL