Gene Hoch_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0150 
Symbol 
ID8542529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp219719 
End bp220435 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content73% 
IMG OID646384946 
Producthypothetical protein 
Protein accessionYP_003264684 
Protein GI262193475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.431554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCG TGTCGATGGC TTTTCGTTGT TTTTTCGGCC TCCTCTTCGG CGGCTCGCTG 
CCGTCGAAGG CGGCCGCGTA CCTGCCCGAG GAGGCGCGCG CCGCGCTGCC CGAGCGCGCC
CAGAGCGAGG GCGATGGCGA GGCGGCCGAT GCCGAGCTGG TCGCCGACGC CGCCGAGGAG
GCGCGCAAGG CCGAGGAGGC GCGCAAGGCC GAGGAGGCGC GCAAGGCCGA GGAGGCCGCT
CGCAAGGCCG AGGAGGCCGC GCGCAAGGCC GAGGAGGCCG CGCGCAAGAG CGCGGCCCAG
GCCAGCGCGC GCAAGAGCGC CAGCCTGGCC GAGCAGCACA CCGAGGGCGC GCTGGCGCTG
CTGGCGCTGC TGCAGCGCGA GGGCCGGCTG GTCGATTTCC TCCAGGAGTC GCTCGACGAC
TACGACGACG GCGATATCGG CGCCTCGGTG CGCGATATCC ACCGCGGCCT GCGCAAGGTC
ATCACCGAGT ATCTCTCGGT CGAGCCGGTG ATGCCGGGCG AGGAGGATGA CGACGTGAGC
GTGCCCAAGG GCTTCGACCC GGGCGAGGTC CGCCTGATCG GCGAGGTCAG CGGTGAGCCG
CCGTTCCGCG GCGTGCTGCG GCACCACGGC TGGCGCGTGA TCGAGACCAA GCTGCCGCAG
CTCAGCGAGG GCGTCGACCG CCACGTGCTG GCCCCGGCCG AGGTCGAGGT GTCGTGA
 
Protein sequence
MSRVSMAFRC FFGLLFGGSL PSKAAAYLPE EARAALPERA QSEGDGEAAD AELVADAAEE 
ARKAEEARKA EEARKAEEAA RKAEEAARKA EEAARKSAAQ ASARKSASLA EQHTEGALAL
LALLQREGRL VDFLQESLDD YDDGDIGASV RDIHRGLRKV ITEYLSVEPV MPGEEDDDVS
VPKGFDPGEV RLIGEVSGEP PFRGVLRHHG WRVIETKLPQ LSEGVDRHVL APAEVEVS