| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0142 |
|---|
| Symbol | |
|---|
| ID | 8542521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 212898 |
|---|
| End bp | 213881 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646384938 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_003264676 |
|---|
| Protein GI | 262193467 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGC TCTTTTCCGG TATTCAACCC TCTGGTGAGC TGCACCTCGG CAACTATCTC
GGCGCCGTGC GCAACTGGGT CGAGCTGCAA GAGACGTACT TCTGCTACTT CTGCATCGTC
GACTATCACG CCATCACGCA GAGCTACGAG CGCAGCGAGA TGCGCAAGCG GGTCTTCGAC
ATGGCCGTGG ACCTGCTCGC CTGCGGCATC GACCCCGAGC GCTCGGTGCT GTTCGTGCAG
TCGAGCGTGC CCGAGCACAC CGAGCTGTGC TGGGTGCTCA ACACGGTGGC CCAGTTTGGC
GATCTCGGAC GGATGACCCA ATTCAAGGAC AAGTCCAAGC GCCAAGAGGA CAACATCAAC
GTCGGCCTGT TCGACTATCC GGTGCTGCAG GCCGCCGACA TCCTGCTGTA CAAGGCCGCG
GCCGTGCCCG TGGGCAAGGA CCAGGAGCAG CACATCGAGT TCACGCGGCG CCTGGCGCGC
GGGTTCAACA ACCGCTGGAG CAAGGTGTTT GCCGAGCCCG AGGCGCGCTT CTCGGCGGTG
CCCAAGCTGC TCGGACTCGA CGGCAAGGCC AAGATGTCCA AGTCGCTGGA TAACACCATC
CCGCTCGCGG CCACCGAGAA GCAGATCCGC AAGAAGCTGG CCCAGGCGGT GACCGACCCC
AAGCGCGAGA CCCGCGAGGA CCCGGGCAAT CCCGACGACT GCAACCTGTA CACGCTGCAC
ACCTTCTTCT CGAGCGAGGA CGAGCAGCAG TGGGTGCGCC AGGGCTGCAC CACGGCCGGC
ATCGGCTGCG TCGACTGCAA GAAGAAGCTC TCGGACAACG TGATCGACCA CCTGGCCGAT
TACCATAAGC GCCGCGAAGC CCTGCTGGCG ACGCCCGCCC AGGTCGACGA GATCCTGGCC
AAGGGCGCCG AGAAGGCGCG CGCGACCGCG CAGAAGACCA TGGCCGAGGT GCGCAAGAAG
CTCGGCCTGT GGCAACAGCC GTGA
|
|---|
| Protein sequence | MKTLFSGIQP SGELHLGNYL GAVRNWVELQ ETYFCYFCIV DYHAITQSYE RSEMRKRVFD
MAVDLLACGI DPERSVLFVQ SSVPEHTELC WVLNTVAQFG DLGRMTQFKD KSKRQEDNIN
VGLFDYPVLQ AADILLYKAA AVPVGKDQEQ HIEFTRRLAR GFNNRWSKVF AEPEARFSAV
PKLLGLDGKA KMSKSLDNTI PLAATEKQIR KKLAQAVTDP KRETREDPGN PDDCNLYTLH
TFFSSEDEQQ WVRQGCTTAG IGCVDCKKKL SDNVIDHLAD YHKRREALLA TPAQVDEILA
KGAEKARATA QKTMAEVRKK LGLWQQP
|
|---|
| |