Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0136 |
Symbol | |
ID | 8542515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 206778 |
End bp | 207476 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646384932 |
Product | protein TolQ |
Protein accession | YP_003264670 |
Protein GI | 262193461 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACT TTCTTCATAT TTTGGCCGCT GCGGGTCAAC TCGACCTCGC GTCTCTGATC CTTCAAGCTC ACTGGGTCGT CAAAGCCGTG ATGGCGCTCT TGGCGCTGAT GTCGATCATC GGCTGGTACA TCATCGGATC CAAGCACATC CACATTCGCC GAGCGACCAA GGAGTCGAAC AAGTTCCTCG AGTCGTTCTG GCGTACGCGC GACATCGAGC AGATCTATAA ACAGGCCAAA GGGCTGCAGA ACAGCCCGAT CTCGGCCATG TTCCTCGCCG GCTACACCGA GCTGGCCAAG CTCGAGGCCG ACGAGCGGCC CACGCGCGAT AAAGAGGCCG ACCTCGAGAA CGTCGAGCGC GCCCTGCGCC GCACCCAGAC CATCGAGACC ACCAAGCTCG AGAATATGAT TCCGTTTCTG GCCACCACCG GCTCGGCGGC GCCCTTCATC GGCCTGTTCG GCACGGTCTG GGGCATCATG AACTCGTTCA CCTCGCTGGG CAGCGGCGCG GCCAACATCC AGACCGTGGC GCCCGGCATC GCCGAGGCCC TGTTCGCCAC CGCCATCGGC CTGGTCGCCG CCATCCCGGC GGTCATGGCC TACAACTACT TCACCCGGCG CATCCGCATC CAGGTGTCGC ATATGAACAC CTTCGAGCAG GATTACCTCA ACATCATCCG CCGCCACTTC CTGAGCTGA
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Protein sequence | MLDFLHILAA AGQLDLASLI LQAHWVVKAV MALLALMSII GWYIIGSKHI HIRRATKESN KFLESFWRTR DIEQIYKQAK GLQNSPISAM FLAGYTELAK LEADERPTRD KEADLENVER ALRRTQTIET TKLENMIPFL ATTGSAAPFI GLFGTVWGIM NSFTSLGSGA ANIQTVAPGI AEALFATAIG LVAAIPAVMA YNYFTRRIRI QVSHMNTFEQ DYLNIIRRHF LS
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