Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0097 |
Symbol | |
ID | 8542468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 149147 |
End bp | 149899 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646384885 |
Product | protein of unknown function DUF558 |
Protein accession | YP_003264631 |
Protein GI | 262193422 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC GCCTGTTCGT CGAGCCCGCG AGCCTGCGCG CGGGCGCCGT GGAGGTGTGC GGCGACGATC ACCGCTACCT GTTCCGGGTG CGCCGGCTGC GCGTGGGCGA CGCCGTGACC CTGTTCGACG GCGCCGGGCG CGAGGCCGAT GCCCGGGTCG CCGCCATCGA CGGCGAGCGC GCCCAGCTCG AGGTCGCCGA GCCGCGGGCC GTGGTCGCGC CGAGTCCGTG CCGGGTGAGC GTGCTGCCGG CGCTGATCAA GGGCGACCGC ATGGACTTCT GCGTGCAGAA GCTGGTCGAG CTGGGCGTGC ACGAGATCGC GCCGGTGACC AGCGCGCGCA CCGTGGTCAA GCTCGACGGC GCCCGCGCCG CCCGCCGCCG CGAGCGCTTT GTCGATATCG CGCGCGCGGC CGCCCGCCAG TGCGAGCGCG CCACCGTGCC CGAGATCGCC GCGATCGCGC CGCTCGAGCA GGCCCTCGCC AGCCGCGCTC AGACGCCGCT GAAGCTGATC TTGTGGGCCC GTGAGCGCAG CCGCATGCTC CGCGACATCG TCGCGCAGCC GCTGCCTGCC GGCGTCTGCG TGGCGGTCGG ACCCGAGGGC GGGTTCGCGC CAGAGGAGAT CGAGGCGGCC GTGGCCGCGG GCTTTGAACC GGTCGGACTG GGCGGCCACG TGCTGCGCGC GGAGACCGCC TCGCTGGCCG CGGCGGCGCT TTTGATGCTG GCCGCACCGC TTCCGGCTGC TGCAGCTATT TGA
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Protein sequence | MSSRLFVEPA SLRAGAVEVC GDDHRYLFRV RRLRVGDAVT LFDGAGREAD ARVAAIDGER AQLEVAEPRA VVAPSPCRVS VLPALIKGDR MDFCVQKLVE LGVHEIAPVT SARTVVKLDG ARAARRRERF VDIARAAARQ CERATVPEIA AIAPLEQALA SRAQTPLKLI LWARERSRML RDIVAQPLPA GVCVAVGPEG GFAPEEIEAA VAAGFEPVGL GGHVLRAETA SLAAAALLML AAPLPAAAAI
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