| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0092 |
|---|
| Symbol | |
|---|
| ID | 8542463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 144664 |
|---|
| End bp | 146112 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646384880 |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_003264626 |
|---|
| Protein GI | 262193417 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC CCGATTCGAT GACGAACGGC TCGGGGCGCG CCCGTCGGCG CATCCCGGGC
CCCGCATTGC CGCGCCGCGC GCTGCTGGCC GCCGCGCTGG CGCTGGCGCT GACCGCCACG
GCGCTGGCGC TACCCGCGCA GGCACAACCG GCCGCGCGCG CAGGTGCTCA GGCGAGCGCC
GAGAGCCAGC TCGCCCTGCC CGCGCTCGAC ACCTGGCAGC TCGACAACGG CATGCAGGTG
GCGTTTTTGC GCATCGCCGA TGCCCCGGTG TTGTCGGTGC AGGTCTGGTA TCACGTGGGC
TCGAAAGACG AGCCGCGCGA TCGCCGCGGC CTGGCCCACA TGTTTGAACA CATGATGTTC
AAGGGTACCG AGAACCTGCG CTCCGAGGAG CACGCACGCT TCATCGACTC GCTCGGCGGA
TACACCAACG CGGTCACCTC GGAAGACGCC ACTCGCTATA TCAACGTCAT TCCAAAACAG
TATCTCGATT TCGTCTGCCA GCTCGAGTCC GAGCGCATGC GCAAGCTGCT GTTTCGCGAC
AGCATGATCC GCACCGAGCG CGAGGTGGTG AAAGAGGAAG TCCGGCAGCA GGAGAACAAC
CCGCTCACCG TGGGTCTGCT GCGCTTTCTC GCCACCGCGT ACACCAAGCA TCCCTACGCG
TGGACCGCGG GCGGCACCAT CGCCGACCTC GACGCCGCCA GCACCGCCGA CCTCAAGCGC
TTCTACGACA CCTATTACGT GCCCAATAAC GCCATGCTGG TGGTCGTCGG CGACGCCTCT
GCCGACGCGG TCAAAGCCGC CGCCGAGCGC TGGTTCGCGC CCATCCCGCG CGGCCAGGAG
CCGCCGCGAC CGGCCGACGA CGCCACCGAG CCCAAGCAGA CCAGCAAGCG CCGCGAGGTG
GTCGCCCCCG GCCAGGTCGG CGTGCTGCTC GCCGGCTATC ACGTGCCCAG CGCGTCGGAC
GACGACTCCT ACCCGCTGCA GGTCGCCAGC CTGGTGCTCG GCGCGGGCGA GTCCTCGCGC
CTCACCCAGC GCCTGGTGCG CGGCGACGAG CTGGCCGTGC AGGCCGGCGC CCTGCTGCTG
GCGCGCGAGC ATCCCGGCAT GCTGTGGACC TTCGCCATCT TCCTGTCGCC CGGAGCCGCC
GACGACATCG AGAGCGCGCT CGCGGCCGAG GTCGCGCGCC TGGCCAGCGA GGGCCCCAGC
GCCGACGAGC TGCGCAAAGC CAAGCATCAG CTCCAGGCCG GGCTGGCGTT CTCACTCGAG
AACGTCGCCG GCCTGGCTGA GCAGATCGGC ATGTCGTGGA TCCTGTCCGG CGACCCCGGC
CGCTGGCGCA ACGATCTCGC CCGCTACCGC GCGGTCACGG CCGATGAGGT CAAACGCGCG
GCCGCCGCCT ACCTGGTCGA CAGCAACCTC ACCGTGGTGG TGGTACCGCC CGCCGGAGCG
CCGCAATGA
|
|---|
| Protein sequence | MTMPDSMTNG SGRARRRIPG PALPRRALLA AALALALTAT ALALPAQAQP AARAGAQASA
ESQLALPALD TWQLDNGMQV AFLRIADAPV LSVQVWYHVG SKDEPRDRRG LAHMFEHMMF
KGTENLRSEE HARFIDSLGG YTNAVTSEDA TRYINVIPKQ YLDFVCQLES ERMRKLLFRD
SMIRTEREVV KEEVRQQENN PLTVGLLRFL ATAYTKHPYA WTAGGTIADL DAASTADLKR
FYDTYYVPNN AMLVVVGDAS ADAVKAAAER WFAPIPRGQE PPRPADDATE PKQTSKRREV
VAPGQVGVLL AGYHVPSASD DDSYPLQVAS LVLGAGESSR LTQRLVRGDE LAVQAGALLL
AREHPGMLWT FAIFLSPGAA DDIESALAAE VARLASEGPS ADELRKAKHQ LQAGLAFSLE
NVAGLAEQIG MSWILSGDPG RWRNDLARYR AVTADEVKRA AAAYLVDSNL TVVVVPPAGA
PQ
|
|---|
| |