| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0065 |
|---|
| Symbol | |
|---|
| ID | 8542435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 95005 |
|---|
| End bp | 95838 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646384852 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_003264599 |
|---|
| Protein GI | 262193390 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.255284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGACG GCTCTGCCAC CTGCCAGCGC CGCGTGCAGC GCATTGCGGT GGACGGTGCA
CGCGAGACGC TCCGCGACGC GATCGCGGTC GAAGAGCCGT TGGAGTTGCG CACCCAGGGC
CGGCCGCTCG TGGTCGTGAT GCGCACGCCC GGGCACGACC GCGAGTTGGC CCGCGGGCTG
CTCTTTGGCG AGGGCCTGAT CGCGCGCCAG GAGCGGCTGC CGCAGCTCGC GGCGCCGGCC
GATCTGCGCC CCGAGGAGCG CGGCAACGTG CTCGAGACCG GGCTGCCGGC GAGCAGCGGC
GATGCCCCGC GCTGGCTCGC GGCCTCGGCC TGTGGCGTGT GCGGCAAGCG CGCGCTCGCC
GACCTGGCGC TGCGCGCTCA GCCGCTGCGC ACCTCGCTCG CGGTCGCGGT CGCGCTGATC
GCCAGCTTGC CCGAGCGGCT GCGCGCGGCC CAGGAGGTGT TTGCGCGCAC CGGCGGGCTG
CACGCGGCGG GTCTGTTCGA CACCGCGGGC GCGCTGCTGG TCGCGCGCGA GGATATCGGC
CGGCACAACG CCGTGGACAA GGTCATCGGC TGGGCGCTGG AGACCGCCCA GGACGGCGAC
GAGGGCGACG AGGGCGGCGG GTTCTTCGCC GGCGTGCTGC TGTGTGTATC CGGCCGCGTC
GGCTACGAGA TCGTCCAGAA GGCCATCGTC GCCGGCATCG CCATCATCGT CGCGGTATCC
GCGCCCAGCT CGCTGGCCAT CGACCTGGCC GAGCGCTTTC GCGTCACCCT GTGTGGGTTC
ACGCGCGCCG GGCGATTCAA TGTGTATAGC CACCTGAGCC GTATCGCCGA CTGA
|
|---|
| Protein sequence | MRDGSATCQR RVQRIAVDGA RETLRDAIAV EEPLELRTQG RPLVVVMRTP GHDRELARGL
LFGEGLIARQ ERLPQLAAPA DLRPEERGNV LETGLPASSG DAPRWLAASA CGVCGKRALA
DLALRAQPLR TSLAVAVALI ASLPERLRAA QEVFARTGGL HAAGLFDTAG ALLVAREDIG
RHNAVDKVIG WALETAQDGD EGDEGGGFFA GVLLCVSGRV GYEIVQKAIV AGIAIIVAVS
APSSLAIDLA ERFRVTLCGF TRAGRFNVYS HLSRIAD
|
|---|
| |