Gene Hoch_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0062 
Symbol 
ID8542432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp92656 
End bp93390 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content76% 
IMG OID646384849 
ProductNADPH-dependent F420 reductase 
Protein accessionYP_003264596 
Protein GI262193387 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID[TIGR01915] NADPH-dependent F420 reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.103158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CGATCGTCGG TGGAACCGGA AACGAGGGCC GCGGCCTGGG GCTGCGCTGG 
GCCCGCGCCG GCCACGACGT GCGGCTGGGT TCGCGCGAGG CCACGCGCGC CGAGGCGTGC
GCGGCCGAAT TGGCCGAGCG GCTGGGCGCG GGCGCGGACG CGGACGCGAA CCGGGACACG
GCGGCCGCCC CCGCCATCGC CGGCGGCAGC AACATCTGGG CGATCGAGGG CGCCGACGCG
GTGGTGCTCA GCGTGCCCTA CCGCGCCCAC GCGAGCACGC TCGCGGCCCT GGCCGAGGCG
CTCGCCGGCA AGCTGCTCAT CGATATCACC GTGCCGCTGG TGCCGCCGCG GGTGCGCGTG
GTGCATCTGC CAGAGGGTCG GGCCGCCGCC CTCGAGGCTC AGGAGCGGCT CGGCGCCGAG
GTGCGCGTGG TCGCCGCCCT GCACCACGTG AGCGCCGGCC ACCTGGCCGA TCTCGACCAC
GCGGTCGACT GTGACGTGCT GGTGTGCGGC GACGACGAGC ACGCGCGCAA CACCGCGGTG
GCCGTGATCG GCGATCTCGG CGTGCGCGCG CTCGACGCCG GGCCGCTGCG CAACGCCATC
GCGCTCGAGG CGCTCACGCC TGTGCTGCTG CACTTGAATC GACGGTATCG CGGCGGCGGC
GCCGGCCTGC GCATCACGGG TCTGCGCCTG TCCGGCGACG GCGACGGCAG CGGCGGCGGC
GCGTCCCGAT CATGA
 
Protein sequence
MRIAIVGGTG NEGRGLGLRW ARAGHDVRLG SREATRAEAC AAELAERLGA GADADANRDT 
AAAPAIAGGS NIWAIEGADA VVLSVPYRAH ASTLAALAEA LAGKLLIDIT VPLVPPRVRV
VHLPEGRAAA LEAQERLGAE VRVVAALHHV SAGHLADLDH AVDCDVLVCG DDEHARNTAV
AVIGDLGVRA LDAGPLRNAI ALEALTPVLL HLNRRYRGGG AGLRITGLRL SGDGDGSGGG
ASRS