| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0055 |
|---|
| Symbol | |
|---|
| ID | 8542425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 86097 |
|---|
| End bp | 87347 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646384843 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_003264590 |
|---|
| Protein GI | 262193381 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5640] Secreted trypsin-like serine protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.16054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCTC GCTCCGCTTC TTCTCCCGTC GCTCCGTCCA CCTCGCTGGC GCTGGCCGCC
CTGCTGGCGC TGGCCGCAGG CAGCTCCGCC TGCGCCGAGG GCTCGATCTT CGGCGCCGAC
AAGTTCTGCG GCGACACGCG CACGGCGCCC AAGGTCTACT ACGGCACCCT GCTGCCCTCG
CTGGTGCCGC TCACGCCCGA GCAGTTGCTC TCGGTGGGCA GCTTCCGGCT GTGCAGCGGC
ACGCTGATCG CGCCCACCTG GGTGCTCACG GCCCAGCACT GCGGCCTCGC GGTCGGCGCC
AACTTCTGCA TGGGCGACTC GCCCAGTGAC CCGGACGTGT GCATCCGCTC CTCGGCCGTG
TACAACCATC CCGACGCCGA CATCACCCTG GTCGAGCTGA GCGCAGACGC GCGCGGCGCG
GTGCCGGGTG TGGTGCCGCT GCCGTACATG GACGAGTCCC TGGGCCAGGA GTGGATCGGC
CGCCGCGCCG AAGCTGCCGG CTACGGCCAG ACCGAGACCG GCGCGCTGGG CACGCGCTAC
TTCACGGCCG AGCCCATCGT CGCGCTCGAC AGCGGCTTCG CGACCATCGA CGGCGAGGGT
CAGCGCGGCG TGTGTTTTGG CGACTCGGGC GGACCGCTGC TGATCATCGC CGACGATGGC
ACCGTGCGCG TCGCCGGCGT GCTCAGCAAC GGCGACGACA CCTGCGTGGG CCGCGACAAC
TTCACCCGCG CCGACAGCTA CCGCGACTGG ATCGCCAAGT ACGCGGGCGA GCCGCAGCTC
GGCGAGGGCG ATCAGAGCTG CGTCCAGCTC GGCCGCGTCG GCCGCTGCGA GACCGAGCGC
GCGGTGTGGT GCGGCAACGA GCGGGTCCAG ACCGAGGTCT GCGCGGCCGG TACCGCGTGC
GGCTGGGACG CGGGCGACGG CGGCTTCCGC TGCATCGCGG GCGAGGATCC CTGCGGCGGG
GTGGACGCGG TCGGCACCTG CGACGGCGAG ATCGCCCGCT GGTGCGACAA CGGCGTGCCC
CAGGCCCGCG ACTGCGGGGT GTGCGGCGAG ATCTGCCTGC CCTCGGTCAA CGGCGTGGGC
GCCTACTGCG TGCCCGATAA CTGCAACGGG CTCGACTATC TCGGCCAGTG CGAGGGCGAC
GTGGTGGTGT GGTGCGACGC CGGTCAGCGG CTCGAACGCG ACTGCGCCGC GCTCGGCCAG
GTGTGCAAGC TCATCGACGA GCAGATCGGT TTTTACTGCG CCGATCCTTG A
|
|---|
| Protein sequence | MPPRSASSPV APSTSLALAA LLALAAGSSA CAEGSIFGAD KFCGDTRTAP KVYYGTLLPS
LVPLTPEQLL SVGSFRLCSG TLIAPTWVLT AQHCGLAVGA NFCMGDSPSD PDVCIRSSAV
YNHPDADITL VELSADARGA VPGVVPLPYM DESLGQEWIG RRAEAAGYGQ TETGALGTRY
FTAEPIVALD SGFATIDGEG QRGVCFGDSG GPLLIIADDG TVRVAGVLSN GDDTCVGRDN
FTRADSYRDW IAKYAGEPQL GEGDQSCVQL GRVGRCETER AVWCGNERVQ TEVCAAGTAC
GWDAGDGGFR CIAGEDPCGG VDAVGTCDGE IARWCDNGVP QARDCGVCGE ICLPSVNGVG
AYCVPDNCNG LDYLGQCEGD VVVWCDAGQR LERDCAALGQ VCKLIDEQIG FYCADP
|
|---|
| |