Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0033 |
Symbol | |
ID | 8542403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 48302 |
End bp | 49774 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646384821 |
Product | Spore coat protein CotH |
Protein accession | YP_003264568 |
Protein GI | 262193359 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5337] Spore coat assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACG CGTTGGGCGT TCTGGGCTGG TTGCCATTCT CGCTGGGCGT AGGCGCCCTG GGAGTCGCGG CCTTGGCTAC TGGTTGCACG GTGGTGGAAG ATCCGACCTT CGTCGGTGGA GAGGCTGTGG GCGGGGAGGA AGCAGCCGCT ATCGGTGGCA GCGACAGCGT GACGCTTGCG GCCAACGAGC CGCTGCCGCC CGACGCGGAG GGATGCCCCG GACTCTATGC CCAGGACCTC CTGCCCGAAT TTCATCTCAC GATCAGCGAA GCCGTGATGT CCACCCTGTA CGAAGACTGG GTGCACGGTC GCGAGCGCAA CTCGCTCGAC GACGACGACA CGCCGTATCA CCCGGTGTCC GAGTTCCGCT ACGGCGACAT CGCCGTGCAG AACGCGATGA TCCGCCTGCG CGGCAACCCC AACTTCTGGC TCGAACAGAA CAAGATGCAG TTCCAGGTCT CGTTCGACGA GATCAACAAG AACGGGCGCT TCATGGGCCA GCGCAAGATG CTCTTCGATG CGGCCACCTT CAACCGCCAC TTCATGCGCG ACCGCTTGTC GCTGTGGATC TTCCGCCAGG CCGGCGTGCC CGCGCCCTGC GCCAACAACG CCCGCCTGTA CATCAACGAC GAGTACTACG GACTGTTCAC CAGCATCGAG AAGCTCGACA ACGTGTTTCT CAAGCGCGTG TTTCCGAACA ACGACCACGG CGATCTGTTC GAGCGCCGCG GCTACGAGCA GAAGACCAAC GAGGACACCT CGGATGACAC GCGTCTCGAC CAGATGCGCA CTTACGCGGA CGCCTTCCCC AGCTCGACCA ATCCCGACGC GGGCGACGGC CTGAATCCCA ACCTCGAGGG ACTCGCGGCG TACATGGACT TCGAGCAGGT GCTGCGCCTG TACGCGGTGG ACGCGATCTT GCCCAACTCC GACGGGCCGT GGGCGGGCGG CTTGAACTAC TACTTCTACG ACCACCCGGG CCAGAACAAG TTCTTCATCC TGCCCTGGGA CCTCGACAAT ACCTTCACGC GGCTCACGCC CGACGTGCAG CCGTACACCT ACAGCAAGCC CAGCCCGTAT CACGGCCGCC CGTACTTCAA CGCCATCCTC AGCGATGACG TCTGGCTGGA TCGCTATGTC GAGATCATCG AGGAGGTGGT CAACGAGATC TACAACACCG ACACGCTGTG GGCGCTGACC GGCACCAACG CGACGATTCC GCTCGAGAAT CTCAGCGACC AGGACCGCCA GCTTCTGGGC GTGTGGTCGG GTCAGATTCG CGACTCGGCC TTTGCCGACA TCAACAAGCC GTACACCAAC CGGCGCATGG AAGACCGCCG CGCGTTCTTC GCCAACTTCC TGGCGGAGCG CGAGACCTGC CTGCGGCAGT GGCTCGAGTG TGTGCACGGC AGCGACACGA CCCGCCAGGG CGTCGAGACC TGCGTCTGCG ATGTCGATCT GCTGAGCGAG TAG
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Protein sequence | MKYALGVLGW LPFSLGVGAL GVAALATGCT VVEDPTFVGG EAVGGEEAAA IGGSDSVTLA ANEPLPPDAE GCPGLYAQDL LPEFHLTISE AVMSTLYEDW VHGRERNSLD DDDTPYHPVS EFRYGDIAVQ NAMIRLRGNP NFWLEQNKMQ FQVSFDEINK NGRFMGQRKM LFDAATFNRH FMRDRLSLWI FRQAGVPAPC ANNARLYIND EYYGLFTSIE KLDNVFLKRV FPNNDHGDLF ERRGYEQKTN EDTSDDTRLD QMRTYADAFP SSTNPDAGDG LNPNLEGLAA YMDFEQVLRL YAVDAILPNS DGPWAGGLNY YFYDHPGQNK FFILPWDLDN TFTRLTPDVQ PYTYSKPSPY HGRPYFNAIL SDDVWLDRYV EIIEEVVNEI YNTDTLWALT GTNATIPLEN LSDQDRQLLG VWSGQIRDSA FADINKPYTN RRMEDRRAFF ANFLAERETC LRQWLECVHG SDTTRQGVET CVCDVDLLSE
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