| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0026 |
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| Symbol | |
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| ID | 8542396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 38081 |
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| End bp | 40033 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646384814 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_003264561 |
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| Protein GI | 262193352 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGC CCAAGTCCGT TTCCTCCTCG CCCGATCCAC TGCGCCGCTG GAGCATCGCC
GACTCGCTGG AGACCTACAG TATCTCTCGT TGGGGCAGCG GCTACGTCTC CATCAACGAC
AAGGGCAACT TGCTCATCAC CCCGCGCGGG CCGGAGCACG GCTCCATCGA CCTCAAGGCC
CTGGTCGAGG AGATCAAGCT GCGCGGCATC CCGACGCCGA TTCTGCTGCG CTTCTCGGAT
ATCCTGCGCT CGCGCATCGA GCTGCTCAAT CAGGCATTCG GCAGCGCCAT CGCCGAGTAC
GAATACCGCG GCCAGTACCG CGGCGTGTAT CCCATCAAGG TCAACCAGTC GCGCATCGTG
GTCCAGGAGA TCATCGAGTT CGGGCGGCCC TATCACTACG GTCTCGAGGC CGGTTCGAAG
CCCGAGCTGC TGGCCGTGAT GGCCGTCCAC GACGACCCCG ACGCGCTGAT CATCTGCAAC
GGCTACAAGG ACGACGAGTA CATCGAGACC GCGCTCTCGG CCTCGCGCCT GGGCCGCAAA
GTCGTCCTGG TCATCGAGAA ACCCGACGAG ATCGACCACA TCCACTCGGT CGCGCAGTCG
CTCGGTATCC GGCCGACCGT GGGCATGCGG GCGCGGCTGA GCGCGCGCGG CGCCGGGCGC
TGGGAGCAGT CGGGCGGCGA CCGCTCGAAG TTTGGCCTGT CGCCGGCCGA GATGCTGCAG
GCGGTGGACA AGCTGCGCTC CTGGGGCCAG CTCGACGGCC TCGAGCTGCT GCACTTCCAC
CTGGGTTCGC AGATTTCGTC CATCCGGTCG ATCAAAACCG CGCTGCGCGA GGCTGGACGG
CTGTTCGTCG AGCTGCACAA GCTCGGCTGC GAGGGCCTGC AGTACTTCGA CGTCGGCGGC
GGCCTGGGCG TGGACTACGA CGGCTCGCAG ACCAACTTCG CCTCGTCGAT GAACTACACC
GTCCAGGAGT ACGCCAACGA CGTGGTGTTC ACGATCCAGG AGATCTGCGA CGAGGCCGAG
GTGCCGCACC CGAACATCGT CACCGAGTCG GGCCGCGCGG TGGCCGCGCA TCACTCGGTG
CTCGTGGTCG ACGTGCTGGC CGTGAGCGAG TTTCAGGACT TCCCCGTGCC CGCGGAGATC
GAGGACGAGG ACGCGCCCCA GCTCCTGCGC AACCTGCACG AGACCTTCCA GGCCATCAGC
GTCAAGAACG TGCACGAGTC GTATCACGAC GCGCTCGAGT ACAAAGAGCA GGTGCTCCAG
CTCTTCAACC TGGGCCACCT GTCGCTCGAG CACCGCGTGC TGTGCGAGCA GATCTTCTGG
GCCACCTGCC AGCGGCTGCT GGCGATCGTG CGCAACCTGC CGCATGTGCC CGAGGAGCTC
GAGAGCCTCA ACCGCGCGCT GGCCGACACC TACTTCTGCA ACTTCTCGAC CTTCCAGTCG
CTGCCCGACT CCTGGGCAGT GGGCCAGCTC TTCCCCATCG TGCCCATCCA CCGGCTCGAC
GAGGAGCCGA CCCGACGCGG CATCCTGGCC GACATCACCT GCGACTCCGA CGGCAAGATC
GACCAGTTCA TCGATATGCG CGACGTCAAA CGCTACCTGG AGCTGCATCG GCCGGGCGCC
GACGAGTACT ACCTGGGCAT GTTCCTGGTC GGCGCCTACC AGGAGATCCT GGGCGACATG
CACAACCTGT TCGGCGACAC CTATACCGTC CACGTGTCCC TCGACGAGGA CGGCAACGGC
TATTCGATCG ACGAGGTCGT GCCCGGCGAC ACCGTGTCCG AGGTGCTGCG CTACGTCGGC
TACGAGCCGA GCGAGCTGCT GCGCCGGGTG CGCCAGCGCG TCGAGCACGC GGTGCGCCAG
AACTGGATCA CGCTCGAGGA GGCGCGCCAG CTCATCGCCC GCTTCAGCGA GGGACTGAGC
GGCTACACCT ACCTGGAGCC GACCACGCGC TGA
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| Protein sequence | MARPKSVSSS PDPLRRWSIA DSLETYSISR WGSGYVSIND KGNLLITPRG PEHGSIDLKA
LVEEIKLRGI PTPILLRFSD ILRSRIELLN QAFGSAIAEY EYRGQYRGVY PIKVNQSRIV
VQEIIEFGRP YHYGLEAGSK PELLAVMAVH DDPDALIICN GYKDDEYIET ALSASRLGRK
VVLVIEKPDE IDHIHSVAQS LGIRPTVGMR ARLSARGAGR WEQSGGDRSK FGLSPAEMLQ
AVDKLRSWGQ LDGLELLHFH LGSQISSIRS IKTALREAGR LFVELHKLGC EGLQYFDVGG
GLGVDYDGSQ TNFASSMNYT VQEYANDVVF TIQEICDEAE VPHPNIVTES GRAVAAHHSV
LVVDVLAVSE FQDFPVPAEI EDEDAPQLLR NLHETFQAIS VKNVHESYHD ALEYKEQVLQ
LFNLGHLSLE HRVLCEQIFW ATCQRLLAIV RNLPHVPEEL ESLNRALADT YFCNFSTFQS
LPDSWAVGQL FPIVPIHRLD EEPTRRGILA DITCDSDGKI DQFIDMRDVK RYLELHRPGA
DEYYLGMFLV GAYQEILGDM HNLFGDTYTV HVSLDEDGNG YSIDEVVPGD TVSEVLRYVG
YEPSELLRRV RQRVEHAVRQ NWITLEEARQ LIARFSEGLS GYTYLEPTTR
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