Gene Hoch_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0019 
Symbol 
ID8542389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp22306 
End bp23013 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID646384807 
Producthypothetical protein 
Protein accessionYP_003264554 
Protein GI262193345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.447387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCAA AGTCCCGCAA TCGAATCGCC CTCTGCGCCG CCGCATTCAC CATGCTGGGC 
GCGCTCTCGG CCGCCGAGGT GCAGGCGGAG GAAGAGCGCA AGTCCGTCGC CGACAAGGAC
GAGGCCAAGA TCGGCATCGG CGCGCGGCTG CGCTACATCC ACATCCCGGC CCAGGCCATC
GAGCTGTTCG TTGAGCAATC GGCCGGCAGC GCCTCGCACC CGGGCGTGGG CGTCGAGTTC
ATCCGCGAGA AGGGCGACAT GGTGTTCACC ATCGGCGTCG AGTACGAATC GATCTCGCCG
CGCGATGGCG TGTACATCGA CAAGGGCGAC TCGATTCCCC AGGACGCTGT GGACTACGTC
GAGTTCGAGG ACTTCAAGTG GCTGGCCCTC GACATCTCGT TCATCGGCCA GCAGCCGATC
TTCGACGACA TCATCCGCCT GCGCTACGGC GCCGGCATCG GCATCGGCAT GCTCATGGGC
GAGATGCGGC GCACCGACTA CGTGTGCACC AGCAGCGATG TCGATAGCTG CCGCCAGGAC
CCCAACGCCG AGCAGATCGA CGACCCCGAG GACCTGCCGC CGGTGCTGCC GCTGCTCAAC
GTGCTGCTCG GCTTGCAGTT TCGGCCCTTC GACAACGTCG CCATCAACTT CGAGGGCGGC
ATCCGCACCG CGCCCTTTGT CGGCACCACC ATGGCGGTGC TGTTCTGA
 
Protein sequence
MIPKSRNRIA LCAAAFTMLG ALSAAEVQAE EERKSVADKD EAKIGIGARL RYIHIPAQAI 
ELFVEQSAGS ASHPGVGVEF IREKGDMVFT IGVEYESISP RDGVYIDKGD SIPQDAVDYV
EFEDFKWLAL DISFIGQQPI FDDIIRLRYG AGIGIGMLMG EMRRTDYVCT SSDVDSCRQD
PNAEQIDDPE DLPPVLPLLN VLLGLQFRPF DNVAINFEGG IRTAPFVGTT MAVLF