Gene Hoch_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0016 
Symbol 
ID8542386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp19010 
End bp19891 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content68% 
IMG OID646384804 
Producthypothetical protein 
Protein accessionYP_003264551 
Protein GI262193342 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.436683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCA CCAAGGAGGC CGATGTGCCC AACGCGCGAT TGCAGCGACT GAAACGCGGA 
TGCGCGCTCC TCATCTGGGG CGCGCTGCTC ACCAGCCTGA GCGGCTGCTT CTGGGTCACG
ACCAAACGCG AAGGCGAAAA ACTGCGCGCC GAGGTCGACT CCCTCGACAG CCGCGTAGCC
GAGCGCGAAG AGGACTTGCA GAGCAAGATC CAGCAGCTCG AGCAGGTGCT GGCCAAGGCC
ACCGCGGTCT TGCAGCGCAA CAGCGCCGAC CTCGGCGCCG ATGTCGCCGC GCTGTCCGAA
GACATCCGCA CCATGCAGGG CCTGGCCTCC GAGGCCAGCC AGATCGCCGA GGAGGTGCGC
GCCGATGTGA CCAGGATGCA GGCCGAGCAG GCCGCGGAAC GGACCGCGGT CGAGGAGCGC
CTCATCCTGC TCGAGGAGCG CCTGGCCAAG CTCGAGGTGC AGGCGGCCAA ACCGCCGAGC
CCCGACGAGC TGTACAGCCA GGGCCGGGCC GCCTTCGAGC GCGGTGATTA CGGCGGCGCC
CAGACCCTGC TGCGCCAGCT CGTCACCCAG TATCCCAGCG ATACCCGCGC CGACGACGCC
CAGTACTACC GCGGCGAGGC CTACTACCGC GAACAGGACT ACGGCGCCGC CATCCGCGAG
TTCCAAAAAG TCTTCGACAA GTACGAGGAC AGCTCGCTGG CCGACGACGC GCTGTTCCGC
GCCGGCGAGG CCGCCCAGAC CCTGCGCCGC TGCTCCGAGG CGCGCGCCTA CTTCGGCGTG
CTGCGGCAGA AGTACCCGCG CTCCAACCTG GTCAACAAGT CCAAGAGCAA GGACCAGGAG
CTCAAGCGCG ACCTCAAGGA CCCCGAGAAG TGCAGCTCGT AA
 
Protein sequence
MILTKEADVP NARLQRLKRG CALLIWGALL TSLSGCFWVT TKREGEKLRA EVDSLDSRVA 
EREEDLQSKI QQLEQVLAKA TAVLQRNSAD LGADVAALSE DIRTMQGLAS EASQIAEEVR
ADVTRMQAEQ AAERTAVEER LILLEERLAK LEVQAAKPPS PDELYSQGRA AFERGDYGGA
QTLLRQLVTQ YPSDTRADDA QYYRGEAYYR EQDYGAAIRE FQKVFDKYED SSLADDALFR
AGEAAQTLRR CSEARAYFGV LRQKYPRSNL VNKSKSKDQE LKRDLKDPEK CSS