Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0016 |
Symbol | |
ID | 8542386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 19010 |
End bp | 19891 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646384804 |
Product | hypothetical protein |
Protein accession | YP_003264551 |
Protein GI | 262193342 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.436683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTCA CCAAGGAGGC CGATGTGCCC AACGCGCGAT TGCAGCGACT GAAACGCGGA TGCGCGCTCC TCATCTGGGG CGCGCTGCTC ACCAGCCTGA GCGGCTGCTT CTGGGTCACG ACCAAACGCG AAGGCGAAAA ACTGCGCGCC GAGGTCGACT CCCTCGACAG CCGCGTAGCC GAGCGCGAAG AGGACTTGCA GAGCAAGATC CAGCAGCTCG AGCAGGTGCT GGCCAAGGCC ACCGCGGTCT TGCAGCGCAA CAGCGCCGAC CTCGGCGCCG ATGTCGCCGC GCTGTCCGAA GACATCCGCA CCATGCAGGG CCTGGCCTCC GAGGCCAGCC AGATCGCCGA GGAGGTGCGC GCCGATGTGA CCAGGATGCA GGCCGAGCAG GCCGCGGAAC GGACCGCGGT CGAGGAGCGC CTCATCCTGC TCGAGGAGCG CCTGGCCAAG CTCGAGGTGC AGGCGGCCAA ACCGCCGAGC CCCGACGAGC TGTACAGCCA GGGCCGGGCC GCCTTCGAGC GCGGTGATTA CGGCGGCGCC CAGACCCTGC TGCGCCAGCT CGTCACCCAG TATCCCAGCG ATACCCGCGC CGACGACGCC CAGTACTACC GCGGCGAGGC CTACTACCGC GAACAGGACT ACGGCGCCGC CATCCGCGAG TTCCAAAAAG TCTTCGACAA GTACGAGGAC AGCTCGCTGG CCGACGACGC GCTGTTCCGC GCCGGCGAGG CCGCCCAGAC CCTGCGCCGC TGCTCCGAGG CGCGCGCCTA CTTCGGCGTG CTGCGGCAGA AGTACCCGCG CTCCAACCTG GTCAACAAGT CCAAGAGCAA GGACCAGGAG CTCAAGCGCG ACCTCAAGGA CCCCGAGAAG TGCAGCTCGT AA
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Protein sequence | MILTKEADVP NARLQRLKRG CALLIWGALL TSLSGCFWVT TKREGEKLRA EVDSLDSRVA EREEDLQSKI QQLEQVLAKA TAVLQRNSAD LGADVAALSE DIRTMQGLAS EASQIAEEVR ADVTRMQAEQ AAERTAVEER LILLEERLAK LEVQAAKPPS PDELYSQGRA AFERGDYGGA QTLLRQLVTQ YPSDTRADDA QYYRGEAYYR EQDYGAAIRE FQKVFDKYED SSLADDALFR AGEAAQTLRR CSEARAYFGV LRQKYPRSNL VNKSKSKDQE LKRDLKDPEK CSS
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