| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0002 |
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| Symbol | |
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| ID | 8542372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2323 |
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| End bp | 3420 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646384790 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_003264537 |
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| Protein GI | 262193328 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCA GGATCCAAAA ATCAGAGTTC CTGAAAGGTC TGCGCATCGC CCAGAGCATT
GCCGACCGGA AGAGCACGAT GCCCATGCTG GCCAACGTGT TGCTCCGGAC CAGCGGCAAG
AAAAAGCTGC TCGTCGCGGC GACTGATCTC AACGTCTCGA TCTCGGCGGA GCTGACCTCC
AAGAACAGCG CGGAGGGCGG CCTCACGGTC GGCGCCAAGG CGCTCTTCGA CATCGTCGCC
AACATGCCCG AGGACGATGT CGTCCTGCGC CGCACCGACA ACAACTGGGC TGAGATTTCC
TGCGGCAAGG TCAAGTACCG GCTCGTCGGT ATGCCCGATC GCGACTTCCC CAAAGTCCCC
GAGCACAGCG AGGCCGAGTT CAAGGACGTC GAGGCCGAGC TGATGCGCGA GATGATCGAC
CGCACGCTGT TCTCGGTCTG CAACGACGAG ACCCGCTTTC ACCTCAACGG CGTGCTCTTC
GAGTCCGACG GCAGCACCGC GCGCATGGTG TCTACCGACG GTCACCGCCT GTCCAAGGTC
GAGCGCACGC TCGAGGGCGC ACCCGCGCTC ACGGCCGGCA TCATCATCCC CAAGAAGGGC
ATCGGCGAGA TCAAGAAGCT CTTGGAGAGC GGCGGCAAGG CCGCGGTGGC GGTCAAGACG
CCGTACATCT TCGTCCACGC CGACTCGATG ATCCTGGCGG TGAAGCTCAT CGAGTCGCAG
TTCCCGCCCT ACGAGCAGGT GATTCCCAAG GAGCACACGC GCGAGGTCGT CATCGACCGG
CAGCGGCTCC TCAGCGCGCT CAAGCGCGCG CAGCTCATGT CCTCGGAGAC CCGGGGCGTG
AAGTTCAACG TGAGCCCCGA CAGCCTGGTC ATCACCAGCG ACAACCCCGA CATCGGCGAG
GTCCGTGAGG AGCTCGAGGC GCAGTACGAC GGCGAGGAGG TGTCGATCGG GTTCAACCCC
AAGTACGTCA TCGACCTGCT GTCGCAGATG GCCACCGACC AGGTGACGCT CGAGCTCAAC
GGCGAGCTCG ACCCCGGCCT GCTGCGGCCA TTCTCGGATG ACAACTACCT GGGCGTGGTC
ATGCCCATGC GCATCTGA
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| Protein sequence | MEFRIQKSEF LKGLRIAQSI ADRKSTMPML ANVLLRTSGK KKLLVAATDL NVSISAELTS
KNSAEGGLTV GAKALFDIVA NMPEDDVVLR RTDNNWAEIS CGKVKYRLVG MPDRDFPKVP
EHSEAEFKDV EAELMREMID RTLFSVCNDE TRFHLNGVLF ESDGSTARMV STDGHRLSKV
ERTLEGAPAL TAGIIIPKKG IGEIKKLLES GGKAAVAVKT PYIFVHADSM ILAVKLIESQ
FPPYEQVIPK EHTREVVIDR QRLLSALKRA QLMSSETRGV KFNVSPDSLV ITSDNPDIGE
VREELEAQYD GEEVSIGFNP KYVIDLLSQM ATDQVTLELN GELDPGLLRP FSDDNYLGVV
MPMRI
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