Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2400 |
Symbol | |
ID | 8535564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2569729 |
End bp | 2570364 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646384774 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_003264256 |
Protein GI | 261856973 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACT TGGTTCGTGA CCGGCGCGGC AACTGGTTAT TTCTCACGCT GATTTTGTCT TGGTTGGTTA TTTTCGCAAG CGGGTGCAGC AAGCAGCCTG TGCACTGGAA TGCCACCGAT ATTACCGGGA TCATGGCGCC ACTGACCTTT AACCTCACCG ACGAGCACGA CCGGGCCGTG ACCGGTAAAG ACTATCGTGG CCATATTGTT CTGCTGTATT TTGGCTATAC CTTTTGTCCG GATGTTTGCC CACAAACCCT GACCCGTCTG GCAACCGCCC TCAACTCATT GGGTAAACAA GCCGATGACG TTCAGGTTCT GTTCGTGTCG GTCGATCCCA ATCGCGATAC TCCGGCGGTA TTGGACAAGT ATGTCCGTTA TTTCTCACCC CGGATTATCG GTTTGACCGG CACACAAAGC CAATTGAAGG CCGTCACCAA ACGTTATCGG GTGGCCTACA GTTATGGCAA GGGATACCCG GACAAAAATA GCTATTACGA AGTCAATCAC AGTGCTTCGA TCTATGTCTT TGATCCCAAA GGTAATGCAC GCCTGCTGAT CGATCAGCAG GAAACCAGCG ATCAGATCGC GGCTGATCTC AAACAACTGA TTTTTGAATC ATGGCCCCAA TCATGA
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Protein sequence | MQDLVRDRRG NWLFLTLILS WLVIFASGCS KQPVHWNATD ITGIMAPLTF NLTDEHDRAV TGKDYRGHIV LLYFGYTFCP DVCPQTLTRL ATALNSLGKQ ADDVQVLFVS VDPNRDTPAV LDKYVRYFSP RIIGLTGTQS QLKAVTKRYR VAYSYGKGYP DKNSYYEVNH SASIYVFDPK GNARLLIDQQ ETSDQIAADL KQLIFESWPQ S
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