Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2362 |
Symbol | |
ID | 8535526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2527103 |
End bp | 2528890 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646384736 |
Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
Protein accession | YP_003264218 |
Protein GI | 261856935 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAA CCATGACCTT GGGTAGGACG ATGGAAAAGA AAACATTCGA TGCGGTAATC ATCGGTGGCG GCGGCGCGGG CCTGCGCGCG GCCTTGCAGC TTGCCGAATC GGGGATCAAG GTAGCCGTGG TCTCCAAAGT GTATCCCACC CGCTCGCATA CGGTTTCGGC CCAGGGCGGC ATTGCCGCCA GTCTCGGCAA TGTGAGTGCG GATAACTGGC ACTGGCACAT GTACGACACG GTCAAGGGTT CGGATTATCT GGGCGATCAG GACGCTATCG AATTCATGTG TCGTAACGCA AACGAAGCGG TGATTGAGCT GGAGCATTAC GGCATGCCGT TCGACCGCCT AGATAACGGC AAGATCTATC AGCGCCCGTT CGGTGGCATG ACTCAAGAGT ACGGTGGCGC ACCTGCTGTG CGAACCTGCT CGGTGGCCGA TCGCACCGGG CATGCCATGC TCCATACGTT GTATCAGCGC AATATCGCCG CCCGTACCCA TTTTTTTGAA GAATACTTCG CAATTGATCT CGTTATGGAC GAACAGGGTC ACGCCTTGGG CGTGGTGGCT TTGGGCATCG AATCCGGAGA ACCAGTGTTC ATCGAGGCGC GCGCCACCCT GCTCGCGACC GGCGGTGCGG GACGGATTTT CTCGGCCACC ACCAATGCCT TGATCAATAC GGGCGATGGC CTCGGGATGG CACTGCGCGC AGGCATCCCG CTGGAAGACA TGGAGTTCTG GCAATTTCAC CCCACCGGGA TTCATGGTGC GGGCGTGCTG GTGACCGAAG GGGTGCGCGG CGAAGGCGGT TATCTGGTGA ACAAGCACGG CGAGCGCTTT ATGGAGCGTT ACGCGCCCAA TGCCAAGGAT CTGGCCAGCC GGGATGTTGT TTCCCGCGCC ATGGCGGTAG AGATTTTCGA AGGTCGAGGC TGCGGCGAAC AGGGCGACCA CGTGCTGCTC AAGCTCGACC ACCTCGGACC TGATGTCATT CATCAGCGTC TGCCGGGAAT CAGTGAGCTG GCGAAAAAAT TCGCCCATGT CGATCCGGCC AAAGATCCGA TTCCCGTCGT ACCCACCGTG CATTACATGA TGGGCGGCAT TCCGACCGAC CTGCATGGTC GCGTGGTGAA GCCAGCGGCT GACGGCACGC AGGCTGCGGT TCCCGGCCTC TACGCCATCG GCGAATGCGC CTGCGTATCG GTGCATGGTG CCAATCGTCT GGGCAGTAAT TCCCTGCTGG ATCTGATCGT GTTCGGTCGG GCCGCCGGTA ACGATGTGAT TGCGTACTGC CGTGAAAACC CATCGGCACG TGCTGTTCCG TCGGCTTCCT TGGAACGCAT CTCGGCGCGG ATGGCGCGTT GGGAGCGAAA GGGCGAAGGC CCCACCGTGG CGCAGTTGCG CGAAGAAATG CGCACGACGA TGCAGCAGCA TTGCGGCGTG TTCCGAACAG AAGCCGTCTT GCAGGATGGT GTCCGAAAAA TGCAGGAAAT TGCCGCAAAA TTGCCCGATG TGGTGCTGCG CGATCACAGC AAGGTATTCA ACACGGGGCG CATTGAGGCG CTGGAGCTTG AAAACCTGAT GGCGGTAGCG CTGGCCACGA TGATCTCGGC GGCCGCGCGC AAGGAGAGCC GCGGCGCGCA TGCCCGCGAC GATTTCCCCG AACGCAACGA CGCCGAATGG ATGAAGCACT CGCTCTATTT CGCCGCCGAC CAACGTCTCG ATTACAAGCC GGTACGCCAG CAGCCACTGA CCGTGGATGC CTTCCAACCT AAGCCACGCG TTTACTAG
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Protein sequence | MNTTMTLGRT MEKKTFDAVI IGGGGAGLRA ALQLAESGIK VAVVSKVYPT RSHTVSAQGG IAASLGNVSA DNWHWHMYDT VKGSDYLGDQ DAIEFMCRNA NEAVIELEHY GMPFDRLDNG KIYQRPFGGM TQEYGGAPAV RTCSVADRTG HAMLHTLYQR NIAARTHFFE EYFAIDLVMD EQGHALGVVA LGIESGEPVF IEARATLLAT GGAGRIFSAT TNALINTGDG LGMALRAGIP LEDMEFWQFH PTGIHGAGVL VTEGVRGEGG YLVNKHGERF MERYAPNAKD LASRDVVSRA MAVEIFEGRG CGEQGDHVLL KLDHLGPDVI HQRLPGISEL AKKFAHVDPA KDPIPVVPTV HYMMGGIPTD LHGRVVKPAA DGTQAAVPGL YAIGECACVS VHGANRLGSN SLLDLIVFGR AAGNDVIAYC RENPSARAVP SASLERISAR MARWERKGEG PTVAQLREEM RTTMQQHCGV FRTEAVLQDG VRKMQEIAAK LPDVVLRDHS KVFNTGRIEA LELENLMAVA LATMISAAAR KESRGAHARD DFPERNDAEW MKHSLYFAAD QRLDYKPVRQ QPLTVDAFQP KPRVY
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