| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2252 |
|---|
| Symbol | |
|---|
| ID | 8535416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2422744 |
|---|
| End bp | 2423730 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646384632 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein |
|---|
| Protein accession | YP_003264114 |
|---|
| Protein GI | 261856831 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.240842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTG CCGTGTTCAG TAGCAAACCC TACGATAAGG AAAGTCTGAC CCGAGCCAAT
GCGGCTTTCG GGCATGAACT GCAATTCTTT GAAGCGGCAC TAAATCTCCA AACATGCAGC
CTGGCAGAAA ATGCCGAGGC CGTCTGTGTG TTTGTGCACG ATCAGATCGA CGCGCATCTG
CTGCGCTGTC TGGCGGGGCG GGGCGTCAAG GTCGTTGCCC TGCGTTATGC CGGCTTCAAC
AACGTCGATC TGCCAGCCGC GCGTGAAGTG GGCATTGATG TGGTGCGGGT GCCGGCGTAC
TCACCTTATG CCGTGGCCGA GCATGCGGTG GCGATGATGC TGACGCTCAA CCGCCATACC
CATCGGGCCT ATAACCGGGT GCGCGAAGGC AATTTCGCGC TCAATGGCCT GCTCGGGTTC
GATATGAACG GCAAGACGGT CGGCATCGTT GGCACCGGGC GCATCGGCAC CGTACTGGCC
CGCATCATGC TCGGCTTCGG CTGCACCGTG CTTGCATACG ATCTGTATCC GAACGATGAA
TGCAAGGCGC TGGGCGTGCG GTATGTCTCG CTGGATGAAC TACTGCCGCA AAGCGACATC
ATCAGCCTGC ACTGCCCGCT CAGTGAGGAA ACACGCCACC TCATCGATTC GAAGGCGATC
GGCAAGATGA AGCGCGGTGC CATGCTGATC AATACGGGTC GCGGGGCTTT GATCGACACC
CGTGCAGTGA TCGCAGCGCT CAAGCGCGGC CACATCGGGG CGTTGGGCCT GGATGTGTAC
GAACAGGAAG AAAATCTGTT CTTCGAAGAT CACTCCGAGG AGATCATTCA GGATGATGTG
CTTGAACGCC TGATGACCTT CCCCAATGTA CTGGTTACCG CCCATCAGGG TTTTTTCACC
CGAGAGGCGA TCGACGCCAT TGCCGAGACC ACGCTGAATA ATCTCAAGCA GGTTGAAGCG
GGTGAGCCCT GCCCGAATCG CCTGTAA
|
|---|
| Protein sequence | MRVAVFSSKP YDKESLTRAN AAFGHELQFF EAALNLQTCS LAENAEAVCV FVHDQIDAHL
LRCLAGRGVK VVALRYAGFN NVDLPAAREV GIDVVRVPAY SPYAVAEHAV AMMLTLNRHT
HRAYNRVREG NFALNGLLGF DMNGKTVGIV GTGRIGTVLA RIMLGFGCTV LAYDLYPNDE
CKALGVRYVS LDELLPQSDI ISLHCPLSEE TRHLIDSKAI GKMKRGAMLI NTGRGALIDT
RAVIAALKRG HIGALGLDVY EQEENLFFED HSEEIIQDDV LERLMTFPNV LVTAHQGFFT
REAIDAIAET TLNNLKQVEA GEPCPNRL
|
|---|
| |