| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2246 |
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| Symbol | |
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| ID | 8535410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2418177 |
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| End bp | 2419328 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646384626 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_003264108 |
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| Protein GI | 261856825 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG CGTTCCATCC CGACCCGACC ATTGCTCTGG CGCAAGATCT GATTCGCCGG
GCCTCGGTCA CGCCGGAAGA TGCCGGTTGT CAGCCGTTAT TGGCTGAACG TCTTGCCGCA
ATGGATTTCA CGATCACGCC GCTGCGGTTT GGTGCTGTGG ATAACCTCTG GGCGGTGCGT
GGCTCATCCG GCCCGTTGTT TTGTTTTGCC GGTCACACCG ACGTGGTGCC GACGGGCGAT
GCCACAGCCT GGAGCCAGCC GCCGTTTGCC GCGAACATCG TCGATGACGT GCTGATCGGC
CGCGGCAGCG CGGATATGAA AGGTTCGATC GCGGCGATGG TCACGGCCAT CGAGCGTTTT
GTGCAGACGA CGCCCGAACC ACCGTTTCGC ATGGCTTTTT TGATTACCAG CGATGAAGAA
GGCGTGGCCG TCGATGGCAC GGTCAAGGTC ATCGAGTGGT TGAACGCGCG CGATGAAAAA
ATCGACTGGT GTCTGGTGGG CGAACCCTCC AGTCGCGAGC GCCTGGGCGA TGAATACAAG
ATTGGTCGTC GCGGCTCGAT CACGGGCAAT CTCGTTGTCC ACGGCAAGCA AGGCCATGTC
GCCTATCCGC ATCTGGCGGA TAATCCCGTA CACCGCGCCG CGCCGTTTCT GGCCGAACTC
ACGGCCATCG AATGGGATCA GGGCAACGCG CATTTTCCGC CTTCGACCCT GCAAATCGCC
AATATTCAGG CCGGTACGGG CGCGAACAAC GTGATTCCCG GTGCGTTGCA CGTGCAATTC
AATCTGCGCT TCAACACCGA AAGCTCGGTG GAAAAAATCC AGGCACGCGT CGAAGCCTTA
CTGGAAAAAC ACCAACTGCG ACATACCTTG AATTGGTCTG TTTCAGGGCA ACCCTTCCTG
ACGAAACAGG GCGCGTTCGT GCAGGCGGTC GAGGCAGCGG TGGCGCAGGT GACGGGCGTC
AAACCGTTGC CGTCTACGGC GGGCGGCACC TCTGATGGCC GCTTTATTGC ACCGACAGGG
GCAGAGGTGG TGGAGCTCGG CCCGCTGAAC GCGACGATCC ATCAAATTGA CGAGCGAGTG
CCGGTGGCGC ACCTTATCGA TCTGTCGCGC ATTTATGAGG CCCTGCTTAA TCAACTGGCA
GCGACGCTTT GA
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| Protein sequence | MNDAFHPDPT IALAQDLIRR ASVTPEDAGC QPLLAERLAA MDFTITPLRF GAVDNLWAVR
GSSGPLFCFA GHTDVVPTGD ATAWSQPPFA ANIVDDVLIG RGSADMKGSI AAMVTAIERF
VQTTPEPPFR MAFLITSDEE GVAVDGTVKV IEWLNARDEK IDWCLVGEPS SRERLGDEYK
IGRRGSITGN LVVHGKQGHV AYPHLADNPV HRAAPFLAEL TAIEWDQGNA HFPPSTLQIA
NIQAGTGANN VIPGALHVQF NLRFNTESSV EKIQARVEAL LEKHQLRHTL NWSVSGQPFL
TKQGAFVQAV EAAVAQVTGV KPLPSTAGGT SDGRFIAPTG AEVVELGPLN ATIHQIDERV
PVAHLIDLSR IYEALLNQLA ATL
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