| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2217 |
|---|
| Symbol | |
|---|
| ID | 8535381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2385048 |
|---|
| End bp | 2387189 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646384598 |
|---|
| Product | SNARE associated Golgi protein-related protein |
|---|
| Protein accession | YP_003264080 |
|---|
| Protein GI | 261856797 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.107501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC ACGAACCCAC CGAGCGACAA ACCGATCTGT TCTGGCGGCT TGATACGGCC
GAGCAGGTCG GCGTCCTGAT CGACGGCGAA GACTACTACC GGGCTTTTGC CGACTTGCTT
TTGCAGGCTC GTCATCAGGC ATGGGTTCTG TGCTGGGACG TTGATAGCCG CATGGCGCTG
ATCCGGCCCT GCGACGACGC GCACGTGCCT TGTCGTCTGA TTGATGTGCT GCACGACGCA
CTCAACCGCA ACCCCGATCT GCATATCTAT CTGCTGGCCT GGGACTACTC GATGATTTAC
GCGCTTGAGC GTGAGTGGCG CCCCTTGTTC AGCCTGCCCC AGTGCGCGCA CCCTCGGCTG
CACGTGGCCT TCGATAACCA TCATCCGTTG GCCGCTTCGC AGCACCAGAA GACGCTCGTC
ATCGATGATC GCACTGCGTT GGTTGGTGGA TTCGATCCCT CCAAATGGCG GTGGGACAGT
ACGGCGCACG CACCGGGCGA TCCGCGCCGA CACGATCCGA GTGGCGATGC CTACCCGCCT
TTCCATGATG TGGCACTGGC CGTCAGTGGC GCACCGGCGG CGCATGTCGC CACCCTTGCG
CGCAACCGTT GGGCGCTGGC GACCGGCGGG AAGGTGGCAC CGGTATCGAT CGATCCGAAT
GCGCCCACGC CCTGGCCGAC GAATTTGTCC TTGCTGGTCA CCCAGGCGCT GATCGGTATT
GCCCGCACCC TGCCGGCCCA CGAAGAGCAG GAGGAAGCTC GTGAAGTAGA GGCCGCCTTG
CTGGCCCTGA TCGCGTCGGC TCGTCGGTTC ATCTACATTG AGAATCAGTA TTTCACCAGC
CACGTCATCG GTCAGGCCTT GATCGATCGG CTGACCGCGG CGAAGGGCCC AGAGATTGTG
CTGGTGCTGC CGCGCGCGAA AGATGGCTGG CTCGAGCGGG TTACGATGGA TGTCCTGCGG
GCCCGACTCA TCCGCCGGCT ACAGGCCGCC GACAGGCATG ATCGGCTGCG GATTTACTAT
CCCGAGATTC GTGGATTGGC CCCGCAGATG CTCAGTCTGC ACAGCAAGCT GCTGATTGCC
GACGATCGTC ACCTCAACGT CGGCTCGGCC AACATCTCCA ACCGTTCGAT GGGGCTCGAC
AGCGAACTCA ACCTGTCGCT GCTCGGCACG GACCCGGCAA GTCAGGCCGC GATCGACACC
GTTCGCCGAC GTCTTCTGGC GGAACACCTG AGCACGTCGA TCGAGGTTGT CGCACAGACA
GAACAGCGCA CCGGTTCGCT GATCCAAACC ATCGATGCCC TCAACCGGCC GCAGGTTGGC
GATCGCTGGC TCGAACCCCT GGTCATCACG CTGGATGAGT CTCTGGAGCG GCAGGTGCCC
GATGCCGCCG TCATCGATCC CGAACGGCCG CTGCCGCCGG ACGAGCTGAT CGACCTGTTC
ATCGAGTCCG AATATCGCCG CCCACTGGGC AAGCGCGCAC TCGGCATGGC CGTGCTTATC
GCCGGTATGC TGGCGCTTGC GCTGATCTGG CGGTTCACGC CGTTGCAACA ATTTCTGGAT
CCACGCGCGC TTCTGGCGCA TCTTCACACG CTGCGCGCCG AAAGCTGGGG ACCGCTGGCC
GCCTTTGGCC TATTTGTGGT CGCGTCGGTC GCGGGTATGC CCATCACGCC GCTGGTGATC
GCCACGGGGT TGATTTTTGG TGCCTGGACG GGGTTTGGTA TTGCTTTTAT CGGGGCGGTG
CTGGCGGCCG TGCTGGGCTT TGTCATCGGT CAGTTGCTGG GCGCCGGGAC CATGCGCCGA
CTGGCGGGTT CGAAGCTCGA TCGCATCAGC CGACGCCTTG CCCGCAAAGG AATTCTCACT
GTCTTCTCCC TGCGCCTGCT GCCGATCGCA CCGTTCGCGC TGATCAATCT GGTCGCCGGT
GCCTCGCGAC TGAAATTCCG GGACTTTCTC ATCGGCAGTC TGGCGGGACT GTTTCCGGGC
ACCTTTGCGC TGACCTTCTT TTCCCATCAA CTCCTTGAAA CGATCCGCCA CCCCAGTCTG
GCCACCACGG GGCTTTTGCT GTTAATGGCG GGTGTGTTTG TTGCGATCGG CTGGGGGCTC
TCCTACCTGC TTGCGCAGCG CAATCAAGCC TCCGGTTCGT GA
|
|---|
| Protein sequence | MTEHEPTERQ TDLFWRLDTA EQVGVLIDGE DYYRAFADLL LQARHQAWVL CWDVDSRMAL
IRPCDDAHVP CRLIDVLHDA LNRNPDLHIY LLAWDYSMIY ALEREWRPLF SLPQCAHPRL
HVAFDNHHPL AASQHQKTLV IDDRTALVGG FDPSKWRWDS TAHAPGDPRR HDPSGDAYPP
FHDVALAVSG APAAHVATLA RNRWALATGG KVAPVSIDPN APTPWPTNLS LLVTQALIGI
ARTLPAHEEQ EEAREVEAAL LALIASARRF IYIENQYFTS HVIGQALIDR LTAAKGPEIV
LVLPRAKDGW LERVTMDVLR ARLIRRLQAA DRHDRLRIYY PEIRGLAPQM LSLHSKLLIA
DDRHLNVGSA NISNRSMGLD SELNLSLLGT DPASQAAIDT VRRRLLAEHL STSIEVVAQT
EQRTGSLIQT IDALNRPQVG DRWLEPLVIT LDESLERQVP DAAVIDPERP LPPDELIDLF
IESEYRRPLG KRALGMAVLI AGMLALALIW RFTPLQQFLD PRALLAHLHT LRAESWGPLA
AFGLFVVASV AGMPITPLVI ATGLIFGAWT GFGIAFIGAV LAAVLGFVIG QLLGAGTMRR
LAGSKLDRIS RRLARKGILT VFSLRLLPIA PFALINLVAG ASRLKFRDFL IGSLAGLFPG
TFALTFFSHQ LLETIRHPSL ATTGLLLLMA GVFVAIGWGL SYLLAQRNQA SGS
|
|---|
| |