| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2179 |
|---|
| Symbol | |
|---|
| ID | 8535343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2343972 |
|---|
| End bp | 2344787 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646384560 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003264042 |
|---|
| Protein GI | 261856759 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACT CGCCCGTCGC ATTGAATTTT GAGGAATCCG GAGGTGGGTT GCCCGTCATC
ATTATGCACG GTTTGTTCGG CTCTCTGGCG AATTGGCGCG GTGTGGCCCG CAATCTGGCG
GATACTTATC GCGTTATCAA CCTTGATCTT CGCAACCATG GCCGCTCACC CTGGGCAGAC
GATCTGAGTT ATGAAGCCAT GGCCGCCGAT GTGCTGGCGC TCATGGATCG ACTCGGTCTT
GAGCGGGCCA AACTGCTCGG TCACTCTCTC GGCGGTAAAT TGGCGATGGT ACTGGCAGAC
CAGGCGCCGG AGCGTTTTAC GCAACTGGTG GTGGTCGACA TCGCCCCCAA AGCCTATCCC
GCCTGGCATC AGGATGTCTT CGCGGGATTA CGAGCGGTCG ATCTGGATCA TCTGGCATCA
CGAGAACAAG CGCGAAGCCA AATGGGACAA TTCATCTTCG ACCCGGAAGT TCGCGCCTTT
CTTGCCGCCA ATCTCAGCCA TAACACGCAA TCTGGACAGG GCGCATGGCG CTGGCGGTTC
AATCTGGACG TGTTGCAGCA GTCTTATCTG GAAACGTCAC AAATGCCCGA CCTACAGGGA
TTTTTCTGCG GGCCGGCTCT ATTTGTCCGT GGCGCCGGCT CCGCCTACAT CGAGCCGGAC
GATCGCTCGA TCATCATCCG AGACTTTCCC GGCGGCTGCA TACACACCCT CAAGAAAGCC
AAACACTGGC CACATGTCGA AGACCCGCAG GGCTTCATGA ACGCCATACG ACACTTCTTT
ATTGACGGCT GCAAAGGAAT CAATAAAACA TCCTGA
|
|---|
| Protein sequence | MKHSPVALNF EESGGGLPVI IMHGLFGSLA NWRGVARNLA DTYRVINLDL RNHGRSPWAD
DLSYEAMAAD VLALMDRLGL ERAKLLGHSL GGKLAMVLAD QAPERFTQLV VVDIAPKAYP
AWHQDVFAGL RAVDLDHLAS REQARSQMGQ FIFDPEVRAF LAANLSHNTQ SGQGAWRWRF
NLDVLQQSYL ETSQMPDLQG FFCGPALFVR GAGSAYIEPD DRSIIIRDFP GGCIHTLKKA
KHWPHVEDPQ GFMNAIRHFF IDGCKGINKT S
|
|---|
| |