Gene Hneap_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2165 
Symbol 
ID8535329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2323808 
End bp2325190 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content55% 
IMG OID646384546 
Productdiguanylate cyclase 
Protein accessionYP_003264028 
Protein GI261856745 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACT CGGCAAAAAC GGATTACCGC GCCAAATACG AACAGTTGCT GGATGAGTTC 
AGTTCGCTTG AAACCAGCGA GCAACTCCAG CAGAGTTTGT TGCGTAGCCT GCTTAACCGA
GTTTTGTTTG CGGTGGATAA AGCGTATCCC ACTCTGGCCA AAGAGAGTCA GGCGCTGCGC
GATCTCATGC GCCAGATCGG TGATGGACCG CTGCCTGTGG CCCGCATTCA ACCGGGAATC
GAGCATCTGG CCGAAGCCAT TCGAGCCATC GAAGCAGGTG ATCCGACCCC GGATCGCGAA
GAGGCGTTGA GTAACGACGA AGCGGCCGAG CGTGTGGACG TTCGGGATTT TCTTCCGCTG
TTACTGGAAC GGGTGGCCTT CACCGAGTCG ATGGAGGGCC GACGCGAAAA GCTCCTGGCT
ATTTTGAATA ATCCCAAAGA CAAGACCCTG AATTCCATCT TGATCGATCG TGCGGCCACG
CTAATCAACG ACATGCGTCG CGCGCTCGAA AATGAAAAAA ACGAGTTGAC CGAGTTCCTG
CGGCAGCTAA CGGAAGCCTT GTCCGAAATC GATCAACACA CGCTCGCCAA CCTCGGCGAT
ATCGAGACGC AACGCAAGGT TCAGGAAGCC TTGGGTAACG CGGTTACCGA GCAGGTGTCG
CACATTGATC GTACCGTTTC CGATGCGACC GATCTGGATG AACTAAAGCG TGTCGTTCGT
CAGCGAGTGG CACGGATCAG CGAGCAGATC GATACGTTTC GCAAGATGGA AGATAAGCGT
CTTGCCGCGG TCGAGTTGGA AAACAACCAG ATGCGTGAGC GCATCGCTAA GCTCGAAGCA
TCGCGTGTGG TGCTGCACGA GCAACTGGTT GCCAGCACAC AGAAAATGTT GCGTGATACT
CTCACCGGAT TGCCGAATCG TTTGGCCTTC GATGAGCGTG TAGCGCTCGA GGCGGCCCGG
ATGCAGCGTG AGAAAACACC TTTATGCCTA GCGCTTTGGG ATGTCGATTA TTTCAAGCGT
GTTAACGATA CCTTCGGCCA CCAAGCGGGC GACAAGGCCT TGCACGTCGT TGGGAAGACA
TTGAGTCAGT TGATCCGCGA TGTGGACATG GTCGCGCGCT ATGGAGGCGA GGAATTTGTG
ATGGTGCTGC CGAAAGCAGA CTTACAGCAA GCGTTCGTCG TGCTGGAGCG CATTCGGGAA
AAGCTGGCGG GCACTGCTTT CCGCTTTAAG GACACGCCGC TGAAAATCAC CTTATCCTGC
GGTGTCGCCG AGTTCGGTGC GGGTGAAACG ATTGAAAGCG TGATGGCCCG GGCCGATGAG
GCCCTGTATC GAGCCAAATC AAATGGCCGG AATCGTACAG AAATGTCGCA TTCTAAGCGG
TAA
 
Protein sequence
MNDSAKTDYR AKYEQLLDEF SSLETSEQLQ QSLLRSLLNR VLFAVDKAYP TLAKESQALR 
DLMRQIGDGP LPVARIQPGI EHLAEAIRAI EAGDPTPDRE EALSNDEAAE RVDVRDFLPL
LLERVAFTES MEGRREKLLA ILNNPKDKTL NSILIDRAAT LINDMRRALE NEKNELTEFL
RQLTEALSEI DQHTLANLGD IETQRKVQEA LGNAVTEQVS HIDRTVSDAT DLDELKRVVR
QRVARISEQI DTFRKMEDKR LAAVELENNQ MRERIAKLEA SRVVLHEQLV ASTQKMLRDT
LTGLPNRLAF DERVALEAAR MQREKTPLCL ALWDVDYFKR VNDTFGHQAG DKALHVVGKT
LSQLIRDVDM VARYGGEEFV MVLPKADLQQ AFVVLERIRE KLAGTAFRFK DTPLKITLSC
GVAEFGAGET IESVMARADE ALYRAKSNGR NRTEMSHSKR