Gene Hneap_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2155 
Symbol 
ID8535319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand- 
Start bp2315749 
End bp2316420 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID646384536 
ProductDNA repair protein RadC 
Protein accessionYP_003264018 
Protein GI261856735 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.365065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTA CGGACTGGCC GGAAGATGAG CGCCCAAGGG AGCGCTTACT CAAGCAGGGC 
GCGGGGGCGT TATCGGATGC CGAGTTGTTC GCCATTTTTT TGCGTACCGG CGTCGCCGGA 
CGTTCTGCGG TGGATTTGGC GCGTGATTTA CTGACGCACT TCGGTGGTGT ACGTGGTCTG 
CTGAACGCCT CGCGGCGAGA CTTTACAGAG GCCAAAGGAT TGGGCGATGC CAAATTCGCG 
CAACTTCAGG CGGTTTTGGA ATTGGCGAGA CGCCATTTCG CCGAAGAACT GGCAGAAGGT 
GCGGTGATCG ACAGCCCGGA GGCTACGCGC CGGTATTTAC AGGCGCAGTT GCGTGATGCG 
GCGCAAGAGG TATTCGCGGT GCTGTTTCTT GATCAGCGTC ATCGCGTGTT GGCCTTCGAG 
CGGTTGTTTT ACGGCACCAT TAATCAGTCG GCGGTGCACC CGCGCGAGGT CGTCAAGGCG 
GTGTTGCGGC ATAACGCTGC GGCCGTGATT CTGGCGCATA ACCACCCTTC GGGCGTTGCC 
GAACCCAGCA CGGCTGATCG GGAGATCACC CTGCGGTTAC GCGATGCGCT CAATCTGATC 
GACGTTCGTT TGCTCGATCA TATGATCGTA GGTGATCGCT GCACCTCGAT GGCGGAGCTG 
GGCATGATTT GA
 
Protein sequence
MAITDWPEDE RPRERLLKQG AGALSDAELF AIFLRTGVAG RSAVDLARDL LTHFGGVRGL 
LNASRRDFTE AKGLGDAKFA QLQAVLELAR RHFAEELAEG AVIDSPEATR RYLQAQLRDA 
AQEVFAVLFL DQRHRVLAFE RLFYGTINQS AVHPREVVKA VLRHNAAAVI LAHNHPSGVA 
EPSTADREIT LRLRDALNLI DVRLLDHMIV GDRCTSMAEL GMI