| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2135 |
|---|
| Symbol | |
|---|
| ID | 8535294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2289013 |
|---|
| End bp | 2289948 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646384512 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_003263999 |
|---|
| Protein GI | 261856716 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGG CTGATCGTGA TGGTTTTATA TGGTTTGATG GTGAGTTGAT CGATTGGCGC
TCTGCTCAAG TCCATGTGCT GACGCACAGT CTTCATTATG GCATGGGTTG TTTTGAGGGC
GTCCGAGCTT ATAAGACAGA TCGCGGAACA TCCATCTTCC GATTGGAAGA TCACACGCGC
CGCCTGACGA ACTCAGCCCG CATTCTTGGT ATGCCCATGC CTTATTCTGA GAGCGTGATT
AACGAAGCAC ACCGCGAAGT CATTCGCTCT AACAAGCTGG ATAGTGCCTA CATGCGTCCG
ATCGTGTTCT ATGGTTCCGA GGGTATGGGG CTTCGGGCGG ATAACCTGAA AGTCCACGTA
GCGGTCGCCG CGTGGGAGTG GGGCGCGTAT TTGGGTGCGG ATAACATTCA AAAGGGCATC
CGAATCAAGA CGTCGAGCTA TTCACGTCAC CATGTCAACG TGACGATGTG CAAGGCCAAG
TCTACCGGTT CTTACATGAA TTCCATGATG GCGTTGCGCG AAGCGACCCA TGATGGCTAT
GACGAGGCCA TGTTGCTGGA TACGCAGGGC TTTGTTGCCG AAGGTTCGGG CGAGAATATC
TTCCTTGTCA GAGACGGTAT TTTGTACACG CCGGATCTGA CGGCAGCCCT TGACGGGATC
ACGCGCCGCA CAATCATGAT CCTGGCCAAA CGATTTGGTT ATGAGGTAAT CGAAAAGCGC
ATCACCCGCG ATGAAGTCTA CATTGCTGAT GAGGCATTTT TCACTGGTAC GGCGGCCGAG
GTCACGCCTA TCCGTGAAGT CGATAACCGG CCGATTGGCA GTGGTTCACG TGGACCGATT
ACCGAACGCT TGCAGTCGGC CTATTTTGAT ATTGTCCATG GTCGCTTCGA TTCTGAATTC
GATGGTTGGC TCGATTTTAC CGAGGTGCGT GCATGA
|
|---|
| Protein sequence | MSMADRDGFI WFDGELIDWR SAQVHVLTHS LHYGMGCFEG VRAYKTDRGT SIFRLEDHTR
RLTNSARILG MPMPYSESVI NEAHREVIRS NKLDSAYMRP IVFYGSEGMG LRADNLKVHV
AVAAWEWGAY LGADNIQKGI RIKTSSYSRH HVNVTMCKAK STGSYMNSMM ALREATHDGY
DEAMLLDTQG FVAEGSGENI FLVRDGILYT PDLTAALDGI TRRTIMILAK RFGYEVIEKR
ITRDEVYIAD EAFFTGTAAE VTPIREVDNR PIGSGSRGPI TERLQSAYFD IVHGRFDSEF
DGWLDFTEVR A
|
|---|
| |