| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2093 |
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| Symbol | |
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| ID | 8535252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2241428 |
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| End bp | 2242264 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646384471 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_003263958 |
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| Protein GI | 261856675 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00243596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCATCG CGCGTAAAAA GGCACCCCGC TTGATTTGGT TGGGTGCCTT TTTTCTTTGT
CTTGCCGGCA TATTTTCTCC ATTCGTGTCG GCGGACGAGC AATGCCCACC GCCAAGAAAC
GCGATTTCCG CCACGGTGGC TTATGTCGAT GACGGCGACA CTGTTCGACT GACCAATGGC
GATCGGGTGC GTCTGGCGGG TATAGATGCC CCCGAAGTGG CGCATCCTGC CTATGGTAAT
CGTGCGGCCA AACCGGCCGA ACCCTTCGGT GATGCCAGCC GTCAGGCATT GATGGCGCTG
TTGGCCACAT CGCACAACCG CTTGCGTGTG CAGTATGGGC TTGAGCCCGA GGATCGTTAC
GGCCGCAAAC TGGCCTATCT TTATCTCCCT GATGGTAAAT CCATTCAGGC GGGTCTGGTC
GCGCGGGGCT TGGCGATGGC GGTGTACATG CCGCCAAATC TTGCACTGGC CGATTGCCTG
ACTGCAATCG AGAAAACGGC CCGTGACCAT CATGTCGGCA TCTGGTCGAA TAGCGAATAT
GATCCGGGTA TAGCAACGGC TAGCGGCATA CCGGATGACG TGCAAGGTGC GGCCATTGTG
CGGGGCAAGG TGCTTTCGGT GCACCGAAGC CGCAAAAACG TATGGATCAA TCTGGAAGGC
CGGGTGGCAT TGCAGATTTC AAGCCGTGCC TGGGATCAGT TCCGAGGCAT TGATTTTGAT
CATTGGAAAG GGCGCGAACT GCGCGCGCGT GGCTGGCTGG TGCACACCAA AAGTCGCTAT
GAAGATTGGC GTATGCCGAT TGAATCACCC CGCTCCATAA ATCTGTTGGG GCGATAG
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| Protein sequence | MFIARKKAPR LIWLGAFFLC LAGIFSPFVS ADEQCPPPRN AISATVAYVD DGDTVRLTNG
DRVRLAGIDA PEVAHPAYGN RAAKPAEPFG DASRQALMAL LATSHNRLRV QYGLEPEDRY
GRKLAYLYLP DGKSIQAGLV ARGLAMAVYM PPNLALADCL TAIEKTARDH HVGIWSNSEY
DPGIATASGI PDDVQGAAIV RGKVLSVHRS RKNVWINLEG RVALQISSRA WDQFRGIDFD
HWKGRELRAR GWLVHTKSRY EDWRMPIESP RSINLLGR
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