| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2090 |
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| Symbol | |
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| ID | 8535249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2237151 |
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| End bp | 2239655 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646384468 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003263955 |
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| Protein GI | 261856672 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.475207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CGCTTGTTAT CGTTGAGTCG CCCGCCAAAG CGAAAACCAT TAAGAAATAC
CTCGGCCCCG GCTACGAGGT GCTCGCCTCC TACGGCCATG TGCGCGACCT GATCCCCAAA
GATGGCGCCG TGGATACCGC GCACGACTTT GCGATGAACT ACACCCTGAT CGACAAGAAC
GTGCGCCACG TCGATGCCAT TAAAAAAGCG CTTAAATCAT CCGACATTCT CCTGCTCGCA
ACCGACCCCG ATCGCGAAGG CGAAGCCATT TCCTGGCATT TGCGCGAACT CTTGGCGGAA
GCAGGCTTGC TGAAGAACAA GACGGCGCAA CGGGTGGTGT TCTACGAAAT CACCAAAAAA
GCAGTACAGG AAGCGGTCGC GCATCCACGC GATCTTTCCA TCGATCTGAT CAATGCCCAG
CAGGCACGCC GCGCACTCGA TTACCTCGTG GGCTTCAACT TGTCGCCGCT CTTGTGGAAA
AAGATCAATC CGGGGCTGTC CGCCGGACGG GTGCAAAGCC CCGCCCTGCG CCTGATCGTG
GAGCGCGAGG CCGAGATCGA AGCGTTCAAT CCGCAGGAAT ACTGGACCAT ACTCGCCGAC
TGCCAGGCCG ATCGGGCTGC CGAAAAGAGC CGATTCAATG CACGCCTGCT GACACTGGAC
GGGCAAAAGG CCGAACAATT CACGCTGACC AATGAAACGG ATGCGCAATC TGCGCGCAGC
CGTATCCTCG AAGCCGCCGC CGGCACACTC ACCGTCCGTT CGGTGGAAAA GCGCGAACGC
AAGCGCAATC CGGCCCCTCC GTTTACCACC TCGACGCTCC AGCAGGAAGG GGTTCGTAAA
CTCGGGCTCT CCGCCTCGCG CGTCATGCGC CTGGCGCAGG AGTTGTACGA AGGCGTCGAC
ATCGGCGCGG GCACCGTGGG TTTGATTACC TACATGCGAA CCGATGCCGT GACCCTCTCC
GAGGACGCGC TCACGCAGAT TCGGGCACAT ATCGGCGATA AGTACGGTGC GGCCTACCTT
CCCGCCAGCC CGAACCGCTA CAAGACCAAA TCCAAAAACG CACAAGAAGC GCACGAGGCC
ATCCGTCCGA CATCAGCGGC ACATACCCCG GATTCGGTAC GCGCTTTCCT GAACAAGGAT
CAGTTCCGCC TGTATGAGAT GATTTTCAAG CGCGCGGTCG CTTCGCAAAT GACACCGGCA
GTCTACGATC AAGTTTCCGT TGATCTCGCC GTCAATGATC AGCATAGCTT TCGCGCCAAT
GGCTCTACCC TCAAATTCCC GGGCTTCATC GCGCTTTATC GCGAGGATGA AGACGATGCC
TCAGGGGACA ATGACGAAGA TCGCCGCCTG CCGCCGCTGA CCGTAGGCGA CAAGATTGCC
CTAAACGACA TCGCTGCCGA CCAGCATTTT ACCGAGCCAC CGCCGCGCTT TACCGAGGCG
AGTCTGGTCA AGACGCTGGA AGAGTATGGT ATCGGTCGCC CTTCGACCTA TGCCAGCATC
ATCTCCACCC TCCAGGCGCG TGAGTACGTT CTGCTCGACC AACGGCGCTT CAAACCCACC
GATATGGGCC GGGTCGTTAA TGGCTTTCTG ACCGACTACT TCCGCGATAT TGTCGATTAC
GAATTCACCG CCAAACTGGA AGATGATCTG GATGCCGTGT CCCGCGGCGA ACGCGACTGG
GTGCCATTGA TGCGCGAGTT CTGGACGCCA TTCCATGACC GTGTCGAGCA CACCAATGAG
AATGTCACCC GGCAGGAGGC CGCCCAGGGG CGTGAACTGG GGATCGATCC CAAATCGGGC
AAGCCCGTCT CCGTCCGACT CGGGCGGTTC GGTCCCTTCG CCCAGATCGG CACCAAGGAC
GACGAGGAAA AACCAAAGTT CGCCTCGCTC AAGCGCAGCC AGAGCATTGC CACCATCACG
CTGGATGAAG CCCTGGACCT GTTTCAGTTG CCGAGAAAAC TGGGCGAAAC CCCGGAAGGC
GAACCTGTCG AGGTCGCCAT TGGTCGGTTC GGCCCCTTTG TAAAGTTCGG CAAAATGTAC
GCTTCGCTTG GCAAGGATGA CGATCCGTAC ACCATCGAAC TGCCGCGCGC GCTCGAAATC
ATCGAGATCA AAAAGCTCGC TGAGAAGAAT CGCTACATCA CCCAGTTCGA TAATGGGGTG
TCGGTACAAA ACGGTCGCTA TGGCCCCTAC ATCACCGATG GCAAAAAGAA CGCCAAAATC
CCCAAGGACA AAGATCCAAA ATCCCTGACA CTGGAAGAGT GCGTCGCCTT GCTTGCAGCT
GCCCCTGAGA AGAAATCGGC GCGCGGCAAA ACCGCTGCGA AAGCGACGGC CAAGAAGACG
GCAGCCCCAA AAGCGACGGC TCCGAAAACA ACAGCCAAAA AGTCAACGAC GCCGCGCGCC
AAAAAGGCCA GCGCGACCGA TGCACAAGCG CCTGCAAAGA AGACGCCGGT AAAAAAGCCC
GCCACCGCTC GCAGCAAGAA ACCCGCCGCG ACGATACCGG AATAA
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| Protein sequence | MSQTLVIVES PAKAKTIKKY LGPGYEVLAS YGHVRDLIPK DGAVDTAHDF AMNYTLIDKN
VRHVDAIKKA LKSSDILLLA TDPDREGEAI SWHLRELLAE AGLLKNKTAQ RVVFYEITKK
AVQEAVAHPR DLSIDLINAQ QARRALDYLV GFNLSPLLWK KINPGLSAGR VQSPALRLIV
EREAEIEAFN PQEYWTILAD CQADRAAEKS RFNARLLTLD GQKAEQFTLT NETDAQSARS
RILEAAAGTL TVRSVEKRER KRNPAPPFTT STLQQEGVRK LGLSASRVMR LAQELYEGVD
IGAGTVGLIT YMRTDAVTLS EDALTQIRAH IGDKYGAAYL PASPNRYKTK SKNAQEAHEA
IRPTSAAHTP DSVRAFLNKD QFRLYEMIFK RAVASQMTPA VYDQVSVDLA VNDQHSFRAN
GSTLKFPGFI ALYREDEDDA SGDNDEDRRL PPLTVGDKIA LNDIAADQHF TEPPPRFTEA
SLVKTLEEYG IGRPSTYASI ISTLQAREYV LLDQRRFKPT DMGRVVNGFL TDYFRDIVDY
EFTAKLEDDL DAVSRGERDW VPLMREFWTP FHDRVEHTNE NVTRQEAAQG RELGIDPKSG
KPVSVRLGRF GPFAQIGTKD DEEKPKFASL KRSQSIATIT LDEALDLFQL PRKLGETPEG
EPVEVAIGRF GPFVKFGKMY ASLGKDDDPY TIELPRALEI IEIKKLAEKN RYITQFDNGV
SVQNGRYGPY ITDGKKNAKI PKDKDPKSLT LEECVALLAA APEKKSARGK TAAKATAKKT
AAPKATAPKT TAKKSTTPRA KKASATDAQA PAKKTPVKKP ATARSKKPAA TIPE
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