Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2034 |
Symbol | |
ID | 8535193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 2177652 |
End bp | 2178674 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 646384415 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003263902 |
Protein GI | 261856619 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0680786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTTG AAGAAACCCT ACTGATCCCT CCCGAGTGTG CCGGCCAACG GCTGGATCAG GCTCTGGCCA AATGCTGGCC GGATTATTCC CGAAGCCGGA TTCAGGACTG GATCAAGTCC GGCGAGATTT TGCTGGATGG CGAGGTGGCA CGTCCGCGTG CGACGGTTCT GGGGGGCGAG TCGGTTGAAC TTCTGGCCGA AATCGAGGAG GCGGTAGCGG CCGTGCCGCA GGATATTCCC CTCGATATCA TTTACGAAGA CGACGCGATC ATCGTGTTGA ACAAGTCGCC GGATATCGTG GTGCATCCAG CGGCGGGTAA TCCGGACGGC ACATTGGTCA ACGCACTGCT GTTCCATGAT CCGAGTCTGG TTTCCGTGCC CCGCGCAGGC GTGGTGCATC GGCTGGACAA ACAGACCTCC GGCGTGATGG TGGTTGCCAA GACACTGGCT GCGCACAAAA TTCTGGTCGA GAACCTGGCG GCGCGTAAGA TTCGGCGTGA ATACGACACG GTCGTGATGG GGCACGTCGT CGCGGGCGGT ACGGTGGACG CGCCGATCGG GCGTCATCCG CGTGACCGTC AGCGTCAGGC GGTCACGGCG ACCGGCAAGC GCGCCGTCAC CCACTATCGG GTGTTGCAGC ACTACGGCGA GCAGACCTGG TTACGCGTGC AACTGGAAAC CGGCCGTACC CATCAGATTC GCGTCCACAT GGCGCATATT CGTCATCCGG TGATCGGCGA TCCGGTCTAC GGTGGGCGCC CTCGAATACC ACCGCGCGCT TCAACCGCCC TGATCGACGT ACTGCGGCAT TTCGAGCGTC AGGCCTTGCA TGCCCGATAC CTAACGCTGG CGCATCCGGT CACCGGCACA CAGATGCGCT TCGAGGCACC GATGCCAGAC GATATGCGCG AACTGATTGC CCTGTTGACC GAATACCGCG ATAACCTGCA TCGTCGTGTG ACGGATGAAG AAGATGACGA TGGCGATGAA GCGGAAGTGT TTTACGTGCG AGATGATGGC TGA
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Protein sequence | MHLEETLLIP PECAGQRLDQ ALAKCWPDYS RSRIQDWIKS GEILLDGEVA RPRATVLGGE SVELLAEIEE AVAAVPQDIP LDIIYEDDAI IVLNKSPDIV VHPAAGNPDG TLVNALLFHD PSLVSVPRAG VVHRLDKQTS GVMVVAKTLA AHKILVENLA ARKIRREYDT VVMGHVVAGG TVDAPIGRHP RDRQRQAVTA TGKRAVTHYR VLQHYGEQTW LRVQLETGRT HQIRVHMAHI RHPVIGDPVY GGRPRIPPRA STALIDVLRH FERQALHARY LTLAHPVTGT QMRFEAPMPD DMRELIALLT EYRDNLHRRV TDEEDDDGDE AEVFYVRDDG
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