Gene Hneap_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2034 
Symbol 
ID8535193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2177652 
End bp2178674 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content61% 
IMG OID646384415 
Productpseudouridine synthase, RluA family 
Protein accessionYP_003263902 
Protein GI261856619 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0680786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTTG AAGAAACCCT ACTGATCCCT CCCGAGTGTG CCGGCCAACG GCTGGATCAG 
GCTCTGGCCA AATGCTGGCC GGATTATTCC CGAAGCCGGA TTCAGGACTG GATCAAGTCC
GGCGAGATTT TGCTGGATGG CGAGGTGGCA CGTCCGCGTG CGACGGTTCT GGGGGGCGAG
TCGGTTGAAC TTCTGGCCGA AATCGAGGAG GCGGTAGCGG CCGTGCCGCA GGATATTCCC
CTCGATATCA TTTACGAAGA CGACGCGATC ATCGTGTTGA ACAAGTCGCC GGATATCGTG
GTGCATCCAG CGGCGGGTAA TCCGGACGGC ACATTGGTCA ACGCACTGCT GTTCCATGAT
CCGAGTCTGG TTTCCGTGCC CCGCGCAGGC GTGGTGCATC GGCTGGACAA ACAGACCTCC
GGCGTGATGG TGGTTGCCAA GACACTGGCT GCGCACAAAA TTCTGGTCGA GAACCTGGCG
GCGCGTAAGA TTCGGCGTGA ATACGACACG GTCGTGATGG GGCACGTCGT CGCGGGCGGT
ACGGTGGACG CGCCGATCGG GCGTCATCCG CGTGACCGTC AGCGTCAGGC GGTCACGGCG
ACCGGCAAGC GCGCCGTCAC CCACTATCGG GTGTTGCAGC ACTACGGCGA GCAGACCTGG
TTACGCGTGC AACTGGAAAC CGGCCGTACC CATCAGATTC GCGTCCACAT GGCGCATATT
CGTCATCCGG TGATCGGCGA TCCGGTCTAC GGTGGGCGCC CTCGAATACC ACCGCGCGCT
TCAACCGCCC TGATCGACGT ACTGCGGCAT TTCGAGCGTC AGGCCTTGCA TGCCCGATAC
CTAACGCTGG CGCATCCGGT CACCGGCACA CAGATGCGCT TCGAGGCACC GATGCCAGAC
GATATGCGCG AACTGATTGC CCTGTTGACC GAATACCGCG ATAACCTGCA TCGTCGTGTG
ACGGATGAAG AAGATGACGA TGGCGATGAA GCGGAAGTGT TTTACGTGCG AGATGATGGC
TGA
 
Protein sequence
MHLEETLLIP PECAGQRLDQ ALAKCWPDYS RSRIQDWIKS GEILLDGEVA RPRATVLGGE 
SVELLAEIEE AVAAVPQDIP LDIIYEDDAI IVLNKSPDIV VHPAAGNPDG TLVNALLFHD
PSLVSVPRAG VVHRLDKQTS GVMVVAKTLA AHKILVENLA ARKIRREYDT VVMGHVVAGG
TVDAPIGRHP RDRQRQAVTA TGKRAVTHYR VLQHYGEQTW LRVQLETGRT HQIRVHMAHI
RHPVIGDPVY GGRPRIPPRA STALIDVLRH FERQALHARY LTLAHPVTGT QMRFEAPMPD
DMRELIALLT EYRDNLHRRV TDEEDDDGDE AEVFYVRDDG