| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2005 |
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| Symbol | |
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| ID | 8535164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2151134 |
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| End bp | 2151670 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646384387 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_003263874 |
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| Protein GI | 261856591 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000559239 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTAAAAC CGCCCAGTCC CGCCGATTCG GTGGTGATCG GCGTAATTGG ACGCGCATTC
GGGGTTAAAG GCTGGAGCTG GATAACCACC TATACACGTC CTGCTGATGG TATTACACAG
TATCGCCAGT GGTTTGTCCG ATCTCCCGCT GATGGTGGAG ACGCTGGAAA GTGGTATCGA
GTGACCAAAT TTGCGGCTCA GAGTCAGGGT ATCGTCGCGA AGCTTGAAGG CATCGATGAT
CGAACCCAGG CTGAAGCGTT GACCGGGGCT GAGATTCTCG TGCCTACCGA TGCTTTGCCA
AAAGTGGCTG AAGGCGAATA TTACTGGCGC GACCTTACCG GTTGTCGTGT GCAACATGTA
TCCGGTCAGG ATTTTGGTGT GGTTCAGGAA TTGCTCGAAA CCGGCGCCAA CGATGTCCTC
GTTGTGGGCG GTGAGGGTCA GCGAGAACGC CTTATCCCGT TCATACCTGA CGATGTGCTG
GTTTCGATCA ATATCGATCA GCGTCTGATT GTGGTGGATT GGGATCCTGA TTTTTAA
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| Protein sequence | MLKPPSPADS VVIGVIGRAF GVKGWSWITT YTRPADGITQ YRQWFVRSPA DGGDAGKWYR
VTKFAAQSQG IVAKLEGIDD RTQAEALTGA EILVPTDALP KVAEGEYYWR DLTGCRVQHV
SGQDFGVVQE LLETGANDVL VVGGEGQRER LIPFIPDDVL VSINIDQRLI VVDWDPDF
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