Gene Hneap_2002 details

Gene Information

• Locus tag: Hneap_2002
• ID: 8535161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 2147888
• End bp: 2149768
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 646384384
• Product: Heat shock protein Hsp90-like protein
• Protein accession: YP_003263871
• Protein GI: 261856588
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0326] Molecular chaperone, HSP90 family

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000463529
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAGC CAGAAACCCG GGGTTTCCAA ACGGAAGTTA AAGAGCTGTT GCAGCTCATG 
ATCCACTCCC TGTATTCCAA TCCCGAGATA TTCCTGCGGG AATTGGTATC CAATGCCTCT 
GATGCTTGCG ACAAGTTGCG TTTCGAGGCC GTGTCCGACG ATGCGTTGTA CGAGGGTGAT 
GAGTCATTGC GTATTCGGGT GAGCTTCGAT GAAGCCGCCA AGACCGTCAC GATCGAGGAT 
AACGGCATCG GGATGAACCG CGATGAAGTA ATCGAGAATA TCGGCACCAT CGCGCGTTCC 
GGTACGAAGG CCTTCATCCA GAAGCTGGGG CAGGACAAAT CGAAAGACCT GTCGCAGATC 
GGTCAGTTTG GTGTGGGTTT CTACTCTGCA TTTATTGTCG CCGATGAAGT CAGCCTGACG 
ACGCGCCGAG CAGGCATGGG TCCGGAGCAT GGCGTGAAGT GGACTTCCCG TGGCGAAGGC 
GAATATACGC TGGAAACGGT CGATAAGCCT GAACGCGGGA CCACCATCGT CTTGCATCTG 
CGTGACGATC ACACCGACTT CGCCAATGAC TGGCGACTGC GTTCTACCAT CCGCAAATAT 
TCCGATCACA TCACCTTCCC GGTTGAGATG CTGAAAGTCC CTGCGCCGAA GGCCGATGAT 
GCAGAAGAGA AAACGGAAGA AACAGCGGAA TGGGAGCGTA TCAACGATGC GCAGGCATTG 
TGGGTGCGTC CGAAATCGGA AATTACCGAT GACGAGTACA CCGAGTTTTA CAAGCATGTG 
GGGCACGACT GGGAGGCCCC GCTGGCCTGG ACGCACAACC GAGTCGAAGG CAAGACTGAA 
TATACTTCCT TGCTCTACAT CCCCGCGCGT GCGCCGTTCG ATCTCTGGGA TCGCGAGTCC 
AAGCAGGGCG TCAAGCTTTA TGTGAAGCGG GTCTTCATCA TGGATGACGC CGAAAAACTG 
ATGCCTCGTT ATCTGCGCTT TGTGCGCGGT GTGATTGATT CGGCTGACTT GCCTTTGAAC 
GTATCGCGTG AAATCCTCCA GTCCAACCGG GTGCTGGACA CGATTCGTCA GGGTTCGGTC 
AAGCGCGTGT TGGGTATGCT CGATCAGATG GCGTCCAACG ATGCGGAGAA ATACGCCAAA 
TTCTGGGGCA CCTTCGGTCA GGTTCTGAAA GAAGGTGTGG GTGAGGACTT CGGCAACCGC 
GAGCAGATCG CCGGGTTGTT GCGATTTGCC TCCACGCAGG CGGGATCGGA TGAGCAGAAC 
GTCAGCCTCA AAGAGGTCAT CGGGCGCATG CAGGAAGGCC AGGATGAGAT TTACTACATC 
ATCGCCGACT CTTATGCTGC GGCGCTTGCC TCTCCGCATC TGGAAATCTT CCGCAAGAAA 
GGCATTGAAG TGCTGCTGTT GTGGGATCGC ATTGATGAAT GGCTGATGTC GCAACTCACA 
GAGTTCGACG GCAAGAAATT CAAATCCGTG ACGCGCGCCG AACTGAGCCT TGACGAGGCA 
GCCGAAGACG AACCGGAAGC CAAGGAAACT CAGGACGCGT TGGTTGAGCG TCTCAAGAAA 
ACTCTGGGTG ACCAAGTCGA TGATGTGCGG ATATCCAAAC GTCTGGTCGA CTCTCCCGCC 
TGTCTGGTGA CCACGGAAGA AGAAATGAGC CTGCATCTTC AACGCTTGCT CAAAGAAGCG 
GGTCAGGCGG CGCCGACCGT GAAGCCCATT TTGGAGATCA ATCCGCAGCA TCAACTGCTG 
CAGCGGGCGG CGAACGAAAC GGACGATGCG CGTTTTGAAG ACATTGCCCG CGTTCTATTG 
GGACAGGCGG CGTTGGCGGA AGGCGGGCAT TTGAGCGATG CTGCCGATTT CGTAACACGG 
TTGAATCGCT TGTTGGTCTG A 

 

Protein sequence

MSQPETRGFQ TEVKELLQLM IHSLYSNPEI FLRELVSNAS DACDKLRFEA VSDDALYEGD 
ESLRIRVSFD EAAKTVTIED NGIGMNRDEV IENIGTIARS GTKAFIQKLG QDKSKDLSQI 
GQFGVGFYSA FIVADEVSLT TRRAGMGPEH GVKWTSRGEG EYTLETVDKP ERGTTIVLHL 
RDDHTDFAND WRLRSTIRKY SDHITFPVEM LKVPAPKADD AEEKTEETAE WERINDAQAL 
WVRPKSEITD DEYTEFYKHV GHDWEAPLAW THNRVEGKTE YTSLLYIPAR APFDLWDRES 
KQGVKLYVKR VFIMDDAEKL MPRYLRFVRG VIDSADLPLN VSREILQSNR VLDTIRQGSV 
KRVLGMLDQM ASNDAEKYAK FWGTFGQVLK EGVGEDFGNR EQIAGLLRFA STQAGSDEQN 
VSLKEVIGRM QEGQDEIYYI IADSYAAALA SPHLEIFRKK GIEVLLLWDR IDEWLMSQLT 
EFDGKKFKSV TRAELSLDEA AEDEPEAKET QDALVERLKK TLGDQVDDVR ISKRLVDSPA 
CLVTTEEEMS LHLQRLLKEA GQAAPTVKPI LEINPQHQLL QRAANETDDA RFEDIARVLL 
GQAALAEGGH LSDAADFVTR LNRLLV