Gene Hneap_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1999 
Symbol 
ID8535158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2143151 
End bp2145913 
Gene Length2763 bp 
Protein Length920 aa 
Translation table11 
GC content56% 
IMG OID646384381 
Productpreprotein translocase, SecA subunit 
Protein accessionYP_003263868 
Protein GI261856585 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.974197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCAA GTATTGTCCG GAAGATTTTT GGCACCCGTA ATGACCGCGT TATCAAGCAG 
ATGCAGCAAC GTGTCGGGCA GATCAATGCA CTGGAACCGC AGATGCAGGC ATTGGATGAT
GCCGCGTTGC GTGCCAAGAC CGATGAGTTT CACCAGCGCT GGCAGAACGG TGAAACCCTG
GATCAATTGC TGCCCGAAGC CTTTGCCGTT TGCCGGGAAA TGAGCCAGCG CGTGCTGGGC
ATGCGCCATT TCGATGTGCA GCTGATCGGC GGCATGGCGT TGCATCAGGG CAAGATCGCG
GAGATGCGAA CTGGTGAAGG CAAGACGCTG GTCGCCACCT TGGCGGTTTA TCTCAATGCC
TTGACCAAGC AAGGCGTTCA TGTCGTCACC GTCAACGATT ACCTCGCCCG GCGTGATGCA
GAGTGGATGG GGCGGCTCTA CAACGCGTTG GGCTTGTCTA TTGGCGTGGT TGTTCCGAAC
ATGGACAACC GCAGCAAATA CGATGCCTAT CGTTGTGATG TGACCTATGC CACGAACAAC
GAGCTCGGTT TCGATTATCT GCGTGACAAC ATGGCCTTCA GCCAAGACGC GGTCATGCAG
CGCGAGTTGG TTTACGCCAT CGTCGATGAA GTGGATTCGA TCCTCATCGA TGAAGCACGC
ACGCCCTTGA TTATTTCCGG CCCGGCGGCG GATTCTTCCG ATACTTATCT GAAAATCAAC
GGGTTGATTC CCGAGCTCAA GAAGCAGGCG CGCGAAGAAC CCAAGGATGA CGAGCCGCCG
TTAACCGACG AAGAACGCGG TGATTTCACC GTCGATGAAA AGAACAAACA GGTGTTTTTG
ACCGAGCAAG GCTTCGAACG AGCGGAAAAC CTGCTGATTC AGATCGGTTT GCTGGAGCCG
GGCGAGTCGC TCTATGACGC GCACAACATC ATGCTGTTGA GTCATTTGAA TTCCGCTCTG
CGTGCGCATG CGATCTATCG TCGGAACGTG GAGTACATCG TTCGCGACAA CGAAGTGATC
ATCGTCGATG AATTCACCGG GCGCACGCTT GCAGGACGCC GTTGGTCGGA AGGCTTGCAT
CAAGCAGTCG AGGCCAAAGA AGGCCTGCCG ATTCAGCCGG AAAATCAGAC ACTGGCGTCC
ATCACCTTCC AGAACTATTT CCGCCTGTAC AAAAAGCTAT CGGGTATGAC CGGTACGGCG
GATACAGAAG CCCGCGAACT GGCTGAAATC TACAATTTGG AAGTGGTGCA AATTCCGACC
AATCGCCCGG TGCAACGTAA CGATCTGGGC GATTTCGTCT TCCTCACGCA GGCGGAAAAA
TACGAAGCCA TCGTCAAGGA TGTTCAGGCC GCCCGTGGCC GCAACCAGCC CACACTGGTC
GGTACTGCTT CGATCGAGTC TTCCGAAATT ATTGCGGCGG CACTGACCAA GGCCAAGATT
CCACACAACG TGCTGAACGC CAAGCATCAT GAGCGCGAGG CGGAGATCAT CGCCGAGGCC
GGTCGTCCGG GCGCGGTAAC CATCGCCACC AACATGGCCG GTCGGGGTAC AGACATCATG
CTGGGCGGGA ATCTGGAACA GGAAACGCTC GCACTGGGCA GCGATGCGAC GGAAGAAGAC
AAAGCCAAGG TTAAGGCTGC CTGGCAAATC CGGCATGACG AAGCGCTGGC TGCGGGCGGC
CTGCACGTGG TGGGTACGGA GCGGCATGAA TCCCGCCGGG TCGATAACCA GTTGCGTGGC
CGTTCGGGTC GTCAGGGTGA TCCGGGCTCG ACCCGCTTCT TCCTGTCGTT GGAAGACAAC
CTGATGCGCG TGTTCGCCTC CGATCGGGTC GGCGGCTTGA TGAAGAAACT GGGTATGCAA
GCGGGCGAGG CAATCGAGCA TCCCTGGGTG ACCCGTGCCA TCGAGAACGC GCAGCGCAAG
GTTGAAGGTC ATAACTTCGA CCAACGTAAG CACTTGCTTG ATTACGACAA CGTTGCCAAC
GAACAGCGCA AGGTCATTTA CGATCAGCGC CGCGCCGTCA TGGCCACCAC AGAAACACAG
GCGATCATCA TCCCGATGCG TCGCGAAGTC ATGGCCGATG TCTTCTCGCG GTTTGTGCCG
CCAGAGGCAC TGGAAGAACA GTGGGATATC GAGGGTCTGA CCCAAACGCT TGCCGAAGAT
TTCGGTCAGC AGATGCCGAT TGCCGAATGG CTGGCCACGG ACAAGGACCT CCATGCCGAG
ACGTTGCTCG ACAAGATCAT TGACACCATG GAAGAGGATT ACAGCGTCAA GGAAACCATC
GTGGGTGCGG ATTCTCTGCG CCAGTTCGAG AAAGGCATTC GGCTGCAAGT GCTCGATGGA
CACTGGAAAG AACATCTCGC CGCGATGGAT TACCTCCGTC AAAGCATCGG TCTGCGCGGG
TATGCACAGA AAAACCCGAC GCAGGAATAC AAGCGCGAAG CCTTCGAGAT GTTCAGCCAC
ATGCTGGATG AAATCAATCT GGAAGTCGTG AAAATCCTGA GCCGTCTGTC CATCGCCCCG
GCGCCCGATC AGGGCGAGGC AGTGATGGAT GACCTGCTTG AAGACGTGGT AGAAGCCCGG
TATCTGGATG AAAGCCGGTT GCAGATGCGA CACGAGTCCG TGGATGAGTT TTCCGAATCA
GCATCCGAGT CGGATGCCGA AGGCCGCACC CCCGTTCGTC AAGAACCGAA GCTGGGGCGT
AACGATCCTT GCTGGTGTGG ATCGGGTAAA AAATATAAGC ACTGCCACGG AAAATTAAAT
TAG
 
Protein sequence
MIASIVRKIF GTRNDRVIKQ MQQRVGQINA LEPQMQALDD AALRAKTDEF HQRWQNGETL 
DQLLPEAFAV CREMSQRVLG MRHFDVQLIG GMALHQGKIA EMRTGEGKTL VATLAVYLNA
LTKQGVHVVT VNDYLARRDA EWMGRLYNAL GLSIGVVVPN MDNRSKYDAY RCDVTYATNN
ELGFDYLRDN MAFSQDAVMQ RELVYAIVDE VDSILIDEAR TPLIISGPAA DSSDTYLKIN
GLIPELKKQA REEPKDDEPP LTDEERGDFT VDEKNKQVFL TEQGFERAEN LLIQIGLLEP
GESLYDAHNI MLLSHLNSAL RAHAIYRRNV EYIVRDNEVI IVDEFTGRTL AGRRWSEGLH
QAVEAKEGLP IQPENQTLAS ITFQNYFRLY KKLSGMTGTA DTEARELAEI YNLEVVQIPT
NRPVQRNDLG DFVFLTQAEK YEAIVKDVQA ARGRNQPTLV GTASIESSEI IAAALTKAKI
PHNVLNAKHH EREAEIIAEA GRPGAVTIAT NMAGRGTDIM LGGNLEQETL ALGSDATEED
KAKVKAAWQI RHDEALAAGG LHVVGTERHE SRRVDNQLRG RSGRQGDPGS TRFFLSLEDN
LMRVFASDRV GGLMKKLGMQ AGEAIEHPWV TRAIENAQRK VEGHNFDQRK HLLDYDNVAN
EQRKVIYDQR RAVMATTETQ AIIIPMRREV MADVFSRFVP PEALEEQWDI EGLTQTLAED
FGQQMPIAEW LATDKDLHAE TLLDKIIDTM EEDYSVKETI VGADSLRQFE KGIRLQVLDG
HWKEHLAAMD YLRQSIGLRG YAQKNPTQEY KREAFEMFSH MLDEINLEVV KILSRLSIAP
APDQGEAVMD DLLEDVVEAR YLDESRLQMR HESVDEFSES ASESDAEGRT PVRQEPKLGR
NDPCWCGSGK KYKHCHGKLN