| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1944 |
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| Symbol | |
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| ID | 8535102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2079276 |
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| End bp | 2080307 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646384325 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003263813 |
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| Protein GI | 261856530 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000945772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAGTG TGACGCAATA CAAAAAGTCT GTCGGCAGCG ACGGCGTTCA GATTTCAACA
CGTCAACGGA TAGCACCTGA TCCTGTGGAC GAAGAAGAAC TGCTTGCTGT GGATGATGTC
GAGTTGGACG ACGATATTGA CTCTCCGGAG AAAAATGAGG AAGAACTGAC AACGACCTTT
AGTGCCAGCG ATTCTGAGTC GGTTGATCCT GTTCGCTTGT ATCTTCGTGA TGTTGAAACC
GAGCGCTTGC TGACGGCGGA AGAAGAGGTG ATTTATTCAC GGCGAGCGCA AAGCGGTGAT
GAATCCGCAC GACAAAAAAT GATCGTCTGC AATTTGCGCC TGGTGATCAA GATTGCGCGA
CGTTACATGA ATCGAGGCCT CGATTTGCTT GATTTGATCG AGGAAGGAAA CATCGGTTTG
ATGAGAGCGG TCGAAAAGTT CGATCCCGAG CGCGGATTTC GTTTTTCCAC CTATGCCACG
TGGTGGATTC GGCAGACGAT CGAACGCGGT TTGATGAATC AATCCAGAAC CGTTCGTTTG
CCAGTGCATG TCGTCAAGGA AGTGCATACT TTTAACCGAG CGGCCAGAAA GATTGCGCAA
AACCAGAATG CCGAAGTGAC CGCTGAACAA ATCGCTGATC ACCTGGACCG ACCCGTAAAT
GAAGTGCTAA AAATCATGGC ATTCAACGAG CGGCAGTCCT CGTTCGATAG CCCGCTGAAA
GGCGATGGGG AATTCTCGTT GCTGGACCTG ATACCCGATC AGGAAAGCAA CCAGCCAGAT
GAACTATTGC AGGATGCTGG CGTTCATGGA TTTCTCGATC AACTCATCGC CCAGCTTGAG
AGCAAGCAGC GAGAAGTATT GGTGCGTCGG TATGGATTGC GCGGGTACGA AACGCATACA
CTCGAAGAAG TGGGCAACCA TTTGGGCGTA ACACGCGAAC GCGTTCGGCA AATTCAGTTG
GAAGCAGTGC GGCGATTGAA ATCACTGGCT AAAAAGGCTG GTGTTACCGC CGAAGTTATT
TTTCCCGACT GA
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| Protein sequence | MGSVTQYKKS VGSDGVQIST RQRIAPDPVD EEELLAVDDV ELDDDIDSPE KNEEELTTTF
SASDSESVDP VRLYLRDVET ERLLTAEEEV IYSRRAQSGD ESARQKMIVC NLRLVIKIAR
RYMNRGLDLL DLIEEGNIGL MRAVEKFDPE RGFRFSTYAT WWIRQTIERG LMNQSRTVRL
PVHVVKEVHT FNRAARKIAQ NQNAEVTAEQ IADHLDRPVN EVLKIMAFNE RQSSFDSPLK
GDGEFSLLDL IPDQESNQPD ELLQDAGVHG FLDQLIAQLE SKQREVLVRR YGLRGYETHT
LEEVGNHLGV TRERVRQIQL EAVRRLKSLA KKAGVTAEVI FPD
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