| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1880 |
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| Symbol | |
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| ID | 8535038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2015536 |
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| End bp | 2016996 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646384261 |
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| Product | cytochrome c oxidase, cbb3-type, subunit I |
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| Protein accession | YP_003263749 |
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| Protein GI | 261856466 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.152701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCGA ACACAGTTGC CATAACGGCA GAGCAGTACA ATTACGACAT TGTCAAAAAA
TTCGCCATCA TGGCGATGGT GTGGGGTTTG CTCGGCATGT CAGCCGGCGT GTATATTGCC
AGCGAACTTG CTTGGCCTTT TCTGAATTTT GACATTGCTG AGATCACATT CGGTCGTCTA
CGTCCCGTGC ATACCAGCTT GGTTATCTTC GGCTTTGGCG GTAGCGCATT GTTCGCCACT
TCTTACTATG TCGTTCAGCG CACATGCCAA ACCAAGTTGT GGGGCGGTAA GTGGCTTCCT
GAATTCACGT TCTGGGGTTG GCAGCTGAGC ATTGGTATCG GTGTGATCCT TTACATGCTT
GGTTACACCC AATCGCGTGA ATATGCCGAA TTCGTCTGGC CGATCGATCT GGGTATTTTG
GTTACCTGGG TTGCTTATGC CACCGTGTTC TATATGACGA TCAAAAATCG TAGCCAGCCG
CATATCTATG TTGCGCTGTG GTTCTATGGT GCGTTTATTC TGGCCACAGC ATTGCTGCAT
ATCTTCAATA ACCTGGCTGT GCCGGTCGCA TGGAATAGCC TGGATTCCTA CAGCCTGTTC
TCGGGTGTGC AGGATGCCAT GACGCAATGG TGGTACGGTC ACAACGCGGT TGGTTTTTTC
CTTACCGCTG CCTTCCTGGG GATGATGTAC TACTTCCTGC CAAAGCAGGC GGAACGCCCG
ATCTACTCAT ATCGTTTGTC GATCGTCCAC TTCTGGGCGC TGACATTCCT TTATATGTGG
GTTGGTGGTC ACCATTTGTT GTGGACTGCG CTACCCCCGT GGGTTGGCTC ACTGGCTTCC
GCCTTCTCCA TCCTGCTGCT GCTGCCTTCA TGGGGCGGTA TGATCAACGG TATCATGACG
CTGTCTGGCG CATGGGAGAA GCTGCGTAGC GATCCAATTA TGCTGTTCTT GATCACTGCG
ATGGCGTTTT ACGGCATGTC GACCTTCGAA GGCCCGATGA TGTCCCTGAA GTCAGTCAAT
GCACTGTCGC ACTACACGGA CTGGACCATC GGTCACGTGC ATTCAGGCGC GCTGGGCTGG
GTAGCCATGA TTACCATCGG TTCGTTCTAC CACATGGTGC CGCGTTTGTG GGGCGTCAAG
CTGTACTCAA CTAAGCTGGT ATTCACTCAT TTCTGGATCG CGACAGTCGG TATCGTTCTG
TATATCGTGT CCATGTGGGT TTCGGGGATC GGTCAAGGTC TGATGCTGCG TGCATTCGAT
CAGTACGGTA ACCTGGCTTA CACTTTCGTT GAAACCGTAA CCTTCATGCA TATCCCTTAT
GCCGTTCGCG CCATGGGTGG TGCCCTGTTC CTTTCGGGTA TGGTGCTGAT GGCTTACAAC
CTGTACATGA CTGTATGGGG CGCGCGTCGT GAAGTGGTGC CCGTTGCGGG TCAAGCTGCC
GTCGCGGCAA CTCGCGTCTG A
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| Protein sequence | MSANTVAITA EQYNYDIVKK FAIMAMVWGL LGMSAGVYIA SELAWPFLNF DIAEITFGRL
RPVHTSLVIF GFGGSALFAT SYYVVQRTCQ TKLWGGKWLP EFTFWGWQLS IGIGVILYML
GYTQSREYAE FVWPIDLGIL VTWVAYATVF YMTIKNRSQP HIYVALWFYG AFILATALLH
IFNNLAVPVA WNSLDSYSLF SGVQDAMTQW WYGHNAVGFF LTAAFLGMMY YFLPKQAERP
IYSYRLSIVH FWALTFLYMW VGGHHLLWTA LPPWVGSLAS AFSILLLLPS WGGMINGIMT
LSGAWEKLRS DPIMLFLITA MAFYGMSTFE GPMMSLKSVN ALSHYTDWTI GHVHSGALGW
VAMITIGSFY HMVPRLWGVK LYSTKLVFTH FWIATVGIVL YIVSMWVSGI GQGLMLRAFD
QYGNLAYTFV ETVTFMHIPY AVRAMGGALF LSGMVLMAYN LYMTVWGARR EVVPVAGQAA
VAATRV
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